Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 ELOCP7-201ENST00000439968 331 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL28P46779 MTCYBP42-201ENST00000444653 1130 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.42□□□□□ -2.18
RPL28P46779 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.42□□□□□ -2.18
RPL28P46779 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPL28P46779 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.42□□□□□ -2.18
RPL28P46779 RN7SL274P-201ENST00000492268 272 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC098799.1-201ENST00000504752 800 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC008526.1-201ENST00000509149 338 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC008837.1-201ENST00000511513 412 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL28P46779 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL28P46779 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.42□□□□□ -2.18
RPL28P46779 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL28P46779 RNU6-1225P-201ENST00000516336 65 ntBASIC1.42□□□□□ -2.18
RPL28P46779 RNA5SP290-201ENST00000517133 127 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL28P46779 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.42□□□□□ -2.18
RPL28P46779 NACAP3-201ENST00000552100 481 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.42□□□□□ -2.18
RPL28P46779 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL28P46779 AC025165.5-201ENST00000602802 578 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC004805.2-201ENST00000605382 482 ntBASIC1.42□□□□□ -2.18
RPL28P46779 TUG1_2.1-201ENST00000614234 87 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC023158.2-201ENST00000614876 543 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC024581.2-201ENST00000619986 252 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC068880.4-201ENST00000623082 495 ntBASIC1.42□□□□□ -2.18
RPL28P46779 MIR3199-2-201ENST00000636243 86 ntBASIC1.42□□□□□ -2.18
RPL28P46779 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RPL28P46779 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPL28P46779 RNU6-97P-201ENST00000363387 104 ntBASIC1.41□□□□□ -2.18
RPL28P46779 RNU5B-4P-201ENST00000363508 111 ntBASIC1.41□□□□□ -2.18
RPL28P46779 RNU6-1207P-201ENST00000384343 107 ntBASIC1.41□□□□□ -2.18
RPL28P46779 RNU6-1122P-201ENST00000384449 107 ntBASIC1.41□□□□□ -2.18
RPL28P46779 SNORA67.4-201ENST00000384688 142 ntBASIC1.41□□□□□ -2.18
RPL28P46779 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RPL28P46779 CIR1P3-201ENST00000405137 479 ntBASIC1.41□□□□□ -2.18
RPL28P46779 TXNP7-201ENST00000406296 293 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AL161449.1-201ENST00000414531 1199 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AL135786.1-201ENST00000415892 214 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 BX276092.3-201ENST00000424182 230 ntBASIC1.41□□□□□ -2.18
RPL28P46779 C1DP1-201ENST00000426049 402 ntBASIC1.41□□□□□ -2.18
RPL28P46779 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AL451074.3-201ENST00000437709 472 ntBASIC1.41□□□□□ -2.18
RPL28P46779 COX7BP2-201ENST00000437976 242 ntBASIC1.41□□□□□ -2.18
RPL28P46779 PTGES3P1-201ENST00000439531 483 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 HIGD1AP2-201ENST00000446367 280 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL28P46779 AC108938.1-201ENST00000451204 136 ntBASIC1.41□□□□□ -2.18
RPL28P46779 RPL18AP17-201ENST00000455326 198 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AC013267.1-201ENST00000458227 267 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AL049873.1-201ENST00000480540 376 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC021382.1-201ENST00000483523 359 ntBASIC1.41□□□□□ -2.18
RPL28P46779 HMGB1P36-201ENST00000487709 576 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AF213884.2-201ENST00000510417 903 ntBASIC1.41□□□□□ -2.18
RPL28P46779 RNU1-103P-201ENST00000516502 125 ntBASIC1.41□□□□□ -2.18
RPL28P46779 RNU2-19P-201ENST00000517288 84 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.41□□□□□ -2.18
RPL28P46779 AC087276.1-201ENST00000529659 480 ntBASIC1.41□□□□□ -2.18
RPL28P46779 CBX3P7-201ENST00000532876 502 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.41□□□□□ -2.18
RPL28P46779 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
RPL28P46779 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.41□□□□□ -2.18
RPL28P46779 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL28P46779 AC005261.5-201ENST00000596280 355 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC008749.1-201ENST00000597650 306 ntBASIC1.41□□□□□ -2.18
RPL28P46779 BNIP3P19-201ENST00000605397 577 ntBASIC1.41□□□□□ -2.18
RPL28P46779 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL28P46779 AC008759.3-201ENST00000613300 508 ntBASIC1.41□□□□□ -2.18
RPL28P46779 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL28P46779 AC104763.3-201ENST00000613765 618 ntBASIC1.41□□□□□ -2.18
RPL28P46779 U4atac.1-201ENST00000618345 95 ntBASIC1.41□□□□□ -2.18
RPL28P46779 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL28P46779 AC007490.1-201ENST00000624321 703 ntBASIC1.41□□□□□ -2.18
RPL28P46779 AC006927.2-201ENST00000639256 389 ntBASIC1.41□□□□□ -2.18
RPL28P46779 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPL28P46779 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
RPL28P46779 AL079343.1-201ENST00000572358 1771 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AL161781.1-201ENST00000354277 403 ntBASIC1.4□□□□□ -2.19
RPL28P46779 RNA5SP160-201ENST00000364866 120 ntBASIC1.4□□□□□ -2.19
RPL28P46779 RNA5SP80-201ENST00000410475 111 ntBASIC1.4□□□□□ -2.19
RPL28P46779 RNA5SP270-201ENST00000411361 118 ntBASIC1.4□□□□□ -2.19
RPL28P46779 RNU6-516P-201ENST00000411381 104 ntBASIC1.4□□□□□ -2.19
RPL28P46779 RPL17P12-201ENST00000413391 526 ntBASIC1.4□□□□□ -2.19
RPL28P46779 RPL26P27-201ENST00000414397 437 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 MTCYBP38-201ENST00000417160 1123 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL28P46779 MTND1P28-201ENST00000435623 950 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AC004383.1-201ENST00000438135 289 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms