Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.08□□□□□ -1.92
HNF4AP41235 AC098614.2-201ENST00000426040 255 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC005326.1-201ENST00000429197 123 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.08□□□□□ -1.92
HNF4AP41235 FAM103A2P-201ENST00000444122 354 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 WASF1P1-201ENST00000447560 1131 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 RPS15AP27-201ENST00000449183 343 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.08□□□□□ -1.92
HNF4AP41235 AL033528.1-201ENST00000453780 140 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 MTCYBP1-201ENST00000454315 1119 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AL590639.1-201ENST00000456484 337 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC146507.2-201ENST00000460608 476 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC008481.1-201ENST00000463278 396 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 RPL31P41-201ENST00000477967 372 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 MTND2P33-201ENST00000506452 1031 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC114786.4-201ENST00000508771 728 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 AC114797.1-201ENST00000514003 728 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.08□□□□□ -1.92
HNF4AP41235 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HNF4AP41235 AP003392.2-201ENST00000527269 208 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC022878.1-201ENST00000530684 149 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 RPL21P12-201ENST00000559810 515 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AL606834.2-201ENST00000602954 668 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AL355877.2-201ENST00000603670 358 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC091805.2-201ENST00000603848 235 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC112191.3-201ENST00000604371 277 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 NDUFA8P1-201ENST00000605525 367 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC091965.4-201ENST00000607691 587 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 uc_338.25-201ENST00000613756 156 ntBASIC3.08□□□□□ -1.92
HNF4AP41235 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.08□□□□□ -1.92
HNF4AP41235 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HNF4AP41235 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HNF4AP41235 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HNF4AP41235 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HNF4AP41235 OR1S2-201ENST00000302592 978 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 FTLP6-201ENST00000355274 422 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HNF4AP41235 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RPS20P2-201ENST00000402520 389 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AL592114.1-201ENST00000403842 483 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 Y_RNA.608-201ENST00000410647 95 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RNA5SP120-201ENST00000410900 112 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 USP9YP13-201ENST00000417797 480 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.07□□□□□ -1.92
HNF4AP41235 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.07□□□□□ -1.92
HNF4AP41235 AC104651.1-201ENST00000427559 735 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC010975.2-201ENST00000427781 588 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.07□□□□□ -1.92
HNF4AP41235 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.07□□□□□ -1.92
HNF4AP41235 GTF2IP20-201ENST00000431663 360 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.07□□□□□ -1.92
HNF4AP41235 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.07□□□□□ -1.92
HNF4AP41235 PGBD4P3-201ENST00000440731 581 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.07□□□□□ -1.92
HNF4AP41235 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 Z75741.1-201ENST00000446793 314 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 MTND1P27-201ENST00000451117 902 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.07□□□□□ -1.92
HNF4AP41235 BX510359.1-201ENST00000456973 237 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RPL21P93-201ENST00000480465 489 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC087190.1-201ENST00000484462 480 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.07□□□□□ -1.92
HNF4AP41235 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.07□□□□□ -1.92
HNF4AP41235 RPL37P25-201ENST00000507308 276 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC113155.1-201ENST00000511141 769 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC022634.1-201ENST00000520765 532 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AP002453.2-201ENST00000533503 320 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.07□□□□□ -1.92
HNF4AP41235 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.07□□□□□ -1.92
HNF4AP41235 ZNF519P3-201ENST00000557158 1032 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 MIR3944-201ENST00000581277 108 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC009977.1-201ENST00000586015 570 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 BNIP3P8-201ENST00000597863 560 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC012468.1-201ENST00000604888 430 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC004908.2-201ENST00000609090 574 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC138749.5-201ENST00000611461 208 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AL589743.7-201ENST00000612637 233 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC008498.1-201ENST00000613012 531 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 AC116165.2-201ENST00000616705 206 ntBASIC3.07□□□□□ -1.92
HNF4AP41235 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
HNF4AP41235 RNU6-1180P-201ENST00000364935 107 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms