Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNU6-88P-201ENST00000606801 100 ntBASIC2.39□□□□□ -2.03
FDFT1P37268 AC009974.1-201ENST00000608881 455 ntBASIC2.39□□□□□ -2.03
FDFT1P37268 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
FDFT1P37268 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.39□□□□□ -2.03
FDFT1P37268 AL158801.5-201ENST00000623123 465 ntBASIC2.39□□□□□ -2.03
FDFT1P37268 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.39□□□□□ -2.03
FDFT1P37268 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
FDFT1P37268 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
FDFT1P37268 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
FDFT1P37268 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FDFT1P37268 SNORA5B-201ENST00000363786 132 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 RNU6-757P-201ENST00000410334 100 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC023141.4-201ENST00000412031 328 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 USP9YP27-201ENST00000418455 438 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 ELOCP9-201ENST00000418624 239 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC106883.1-201ENST00000418805 562 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 TXNL1P1-201ENST00000429528 554 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC084290.1-201ENST00000434995 374 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.38□□□□□ -2.03
FDFT1P37268 AL831737.1-201ENST00000441288 271 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC090096.1-201ENST00000489168 390 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC234781.5-201ENST00000508429 271 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC093809.1-201ENST00000509155 340 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.38□□□□□ -2.03
FDFT1P37268 RNU4-29P-201ENST00000515943 174 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 SCARNA17.1-201ENST00000516211 143 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 SCARNA17.2-201ENST00000516334 143 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.38□□□□□ -2.03
FDFT1P37268 AC023538.1-201ENST00000534576 736 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 VN1R82P-201ENST00000601481 356 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 SCARNA17.4-201ENST00000614296 143 ntBASIC2.38□□□□□ -2.03
FDFT1P37268 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.38□□□□□ -2.03
FDFT1P37268 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.38□□□□□ -2.03
FDFT1P37268 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.38□□□□□ -2.03
FDFT1P37268 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.38□□□□□ -2.03
FDFT1P37268 AC093536.2-201ENST00000565257 1406 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
FDFT1P37268 RPL21P132-201ENST00000331267 462 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 RNU6-884P-201ENST00000363889 107 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
FDFT1P37268 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 USP9YP13-201ENST00000417797 480 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 OSTCP8-201ENST00000445117 448 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 RPL23AP35-201ENST00000451906 501 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 RPL12P25-201ENST00000455592 494 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 AL160314.1-201ENST00000490836 438 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.37□□□□□ -2.03
FDFT1P37268 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
FDFT1P37268 AC105252.1-201ENST00000503089 286 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
FDFT1P37268 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.37□□□□□ -2.03
FDFT1P37268 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC078814.3-201ENST00000553036 491 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC112204.3-201ENST00000623822 332 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 AL356596.1-201ENST00000624230 379 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.37□□□□□ -2.03
FDFT1P37268 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
FDFT1P37268 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.37□□□□□ -2.03
FDFT1P37268 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
FDFT1P37268 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
FDFT1P37268 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.37□□□□□ -2.03
FDFT1P37268 Z82209.1-201ENST00000422141 2135 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FDFT1P37268 RN7SKP266-201ENST00000410232 287 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 RNU2-49P-201ENST00000410666 184 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 AL359704.1-201ENST00000411586 781 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.36□□□□□ -2.03
FDFT1P37268 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.36□□□□□ -2.03
FDFT1P37268 MTCO3P30-201ENST00000426425 670 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.36□□□□□ -2.03
FDFT1P37268 RSU1P2-202ENST00000437884 485 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.36□□□□□ -2.03
FDFT1P37268 MTCO3P45-201ENST00000443036 613 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
FDFT1P37268 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.36□□□□□ -2.03
FDFT1P37268 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.36□□□□□ -2.03
FDFT1P37268 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.36□□□□□ -2.03
FDFT1P37268 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms