Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RORAP35398 AC009902.3-201ENST00000606235 2172 ntBASIC2.37□□□□□ -2.03
RORAP35398 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
RORAP35398 SNORA4.1-201ENST00000364263 144 ntBASIC2.37□□□□□ -2.03
RORAP35398 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.37□□□□□ -2.03
RORAP35398 AL590084.2-201ENST00000401481 382 ntBASIC2.37□□□□□ -2.03
RORAP35398 Z82209.1-201ENST00000422141 2135 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.37□□□□□ -2.03
RORAP35398 RPL35AP22-201ENST00000436855 335 ntBASIC2.37□□□□□ -2.03
RORAP35398 AL049734.2-201ENST00000441066 616 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC011753.1-201ENST00000451001 220 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC233279.1-201ENST00000455300 423 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.37□□□□□ -2.03
RORAP35398 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.37□□□□□ -2.03
RORAP35398 HSPE1P23-201ENST00000509838 286 ntBASIC2.37□□□□□ -2.03
RORAP35398 RNA5SP216-201ENST00000516111 123 ntBASIC2.37□□□□□ -2.03
RORAP35398 RNA5SP291-201ENST00000517222 105 ntBASIC2.37□□□□□ -2.03
RORAP35398 BTF3P12-201ENST00000519620 469 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.37□□□□□ -2.03
RORAP35398 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.37□□□□□ -2.03
RORAP35398 AP002770.2-201ENST00000543613 532 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC123904.3-201ENST00000547218 814 ntBASIC2.37□□□□□ -2.03
RORAP35398 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.37□□□□□ -2.03
RORAP35398 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.37□□□□□ -2.03
RORAP35398 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.37□□□□□ -2.03
RORAP35398 AC135507.1-201ENST00000607214 561 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC024933.1-201ENST00000608472 348 ntBASIC2.37□□□□□ -2.03
RORAP35398 AL139418.1-201ENST00000613613 177 ntBASIC2.37□□□□□ -2.03
RORAP35398 TUG1_2.1-201ENST00000614234 87 ntBASIC2.37□□□□□ -2.03
RORAP35398 AC013470.4-201ENST00000619978 986 ntBASIC2.37□□□□□ -2.03
RORAP35398 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
RORAP35398 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RORAP35398 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
RORAP35398 ELF2P3-201ENST00000445099 1506 ntBASIC2.37□□□□□ -2.03
RORAP35398 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
RORAP35398 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
RORAP35398 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
RORAP35398 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RORAP35398 RNU6-462P-201ENST00000362659 105 ntBASIC2.36□□□□□ -2.03
RORAP35398 RNU6-853P-201ENST00000364306 107 ntBASIC2.36□□□□□ -2.03
RORAP35398 RN7SKP226-201ENST00000364912 300 ntBASIC2.36□□□□□ -2.03
RORAP35398 RNU6-157P-201ENST00000383957 107 ntBASIC2.36□□□□□ -2.03
RORAP35398 RNU6-217P-201ENST00000384164 104 ntBASIC2.36□□□□□ -2.03
RORAP35398 RNU6-432P-201ENST00000384196 109 ntBASIC2.36□□□□□ -2.03
RORAP35398 RSL24D1P4-201ENST00000400938 484 ntBASIC2.36□□□□□ -2.03
RORAP35398 RN7SKP266-201ENST00000410232 287 ntBASIC2.36□□□□□ -2.03
RORAP35398 RN7SKP140-201ENST00000411196 284 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.36□□□□□ -2.03
RORAP35398 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.36□□□□□ -2.03
RORAP35398 AC083875.1-201ENST00000419509 405 ntBASIC2.36□□□□□ -2.03
RORAP35398 SEPT2P1-201ENST00000419651 180 ntBASIC2.36□□□□□ -2.03
RORAP35398 OOSP1P1-201ENST00000423265 274 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.36□□□□□ -2.03
RORAP35398 AC007919.1-201ENST00000429380 217 ntBASIC2.36□□□□□ -2.03
RORAP35398 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.36□□□□□ -2.03
RORAP35398 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.36□□□□□ -2.03
RORAP35398 PIGFP3-201ENST00000441918 722 ntBASIC2.36□□□□□ -2.03
RORAP35398 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.36□□□□□ -2.03
RORAP35398 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.36□□□□□ -2.03
RORAP35398 DUXAP8-207ENST00000456786 622 ntBASIC2.36□□□□□ -2.03
RORAP35398 AP1S2P1-201ENST00000457344 379 ntBASIC2.36□□□□□ -2.03
RORAP35398 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.36□□□□□ -2.03
RORAP35398 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
RORAP35398 RPS20P22-201ENST00000473700 357 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.36□□□□□ -2.03
RORAP35398 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RORAP35398 AC093809.1-201ENST00000509155 340 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC093281.2-201ENST00000510153 597 ntBASIC2.36□□□□□ -2.03
RORAP35398 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC008413.1-201ENST00000511864 177 ntBASIC2.36□□□□□ -2.03
RORAP35398 MTCYBP43-201ENST00000513621 740 ntBASIC2.36□□□□□ -2.03
RORAP35398 SCARNA1-201ENST00000517138 166 ntBASIC2.36□□□□□ -2.03
RORAP35398 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.36□□□□□ -2.03
RORAP35398 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.36□□□□□ -2.03
RORAP35398 MTCO2P15-201ENST00000532655 656 ntBASIC2.36□□□□□ -2.03
RORAP35398 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.36□□□□□ -2.03
RORAP35398 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RORAP35398 AC023824.2-201ENST00000566185 400 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.36□□□□□ -2.03
RORAP35398 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.36□□□□□ -2.03
RORAP35398 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
RORAP35398 TPMTP1-201ENST00000592307 737 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC021171.1-201ENST00000603137 706 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC011458.1-201ENST00000604034 617 ntBASIC2.36□□□□□ -2.03
RORAP35398 AL161729.4-201ENST00000604650 476 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC097478.2-201ENST00000610572 514 ntBASIC2.36□□□□□ -2.03
RORAP35398 HMGB1P24-202ENST00000615653 685 ntBASIC2.36□□□□□ -2.03
RORAP35398 AC010133.1-201ENST00000615809 842 ntBASIC2.36□□□□□ -2.03
RORAP35398 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.36□□□□□ -2.03
RORAP35398 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RORAP35398 MTND5P33-201ENST00000571250 1450 ntBASIC2.36□□□□□ -2.03
RORAP35398 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RORAP35398 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
RORAP35398 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RORAP35398 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RORAP35398 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RORAP35398 RNA5SP289-201ENST00000362332 137 ntBASIC2.35□□□□□ -2.03
RORAP35398 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
RORAP35398 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
RORAP35398 TXNP7-201ENST00000406296 293 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms