Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC090877.1-201ENST00000561418 344 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 AC106782.4-201ENST00000568264 210 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC6A4P31645 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.92□□□□□ -1.78
SLC6A4P31645 AC244505.7-201ENST00000599675 272 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 SNRPGP15-201ENST00000600149 222 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 AC104237.2-201ENST00000612456 443 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 MIR1302-1-201ENST00000637932 143 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 AC006026.1-201ENST00000444025 1803 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SLC6A4P31645 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC6A4P31645 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC6A4P31645 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 RPS4XP5-202ENST00000449995 1334 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC6A4P31645 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A4P31645 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A4P31645 IPO8P1-201ENST00000455509 3109 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SLC6A4P31645 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A4P31645 SNORA63.1-201ENST00000362493 131 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 SNORD113-7-201ENST00000363762 77 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A4P31645 SNORA36C-201ENST00000384289 132 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 RNU6-831P-201ENST00000384548 107 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A4P31645 RN7SKP177-201ENST00000410567 355 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC080125.1-201ENST00000414888 684 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 RPL7L1P10-201ENST00000427790 463 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 SAR1AP4-201ENST00000429225 591 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A4P31645 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 RPL26P6-201ENST00000440913 438 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC104058.1-201ENST00000448028 297 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A4P31645 PRSS3P4-201ENST00000453323 162 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 AC084198.1-201ENST00000477747 402 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 HSPE1P6-201ENST00000479457 291 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AP000926.1-201ENST00000479573 241 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC106872.2-201ENST00000494303 480 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 RBBP4P6-201ENST00000508098 202 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 TTC39CP1-201ENST00000512513 755 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 SNORA31.3-201ENST00000516029 96 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 RNU6-123P-201ENST00000516163 102 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 TRMT10BP1-201ENST00000519377 943 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC008489.1-201ENST00000524271 483 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 AL355836.1-201ENST00000555951 870 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 FAM60BP-201ENST00000578364 658 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 MIR3941-201ENST00000582572 103 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AL670379.4-201ENST00000605279 254 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AC009570.1-201ENST00000609599 745 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AL442067.2-201ENST00000614033 363 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 AL360181.4-201ENST00000621752 134 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A4P31645 MTND5P42-201ENST00000637720 498 ntBASIC3.91□□□□□ -1.78
SLC6A4P31645 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A4P31645 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A4P31645 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SLC6A4P31645 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A4P31645 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.78
SLC6A4P31645 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SLC6A4P31645 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.9□□□□□ -1.78
SLC6A4P31645 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SLC6A4P31645 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SLC6A4P31645 DEFB108F-201ENST00000344638 222 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 RNA5SP502-201ENST00000362694 119 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 RN7SKP44-201ENST00000363602 316 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 SNORA73.2-201ENST00000364946 201 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 Y_RNA.378-201ENST00000365652 113 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 Y_RNA.384-201ENST00000383909 102 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 EIF4E2P1-201ENST00000393781 255 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 FAT1P1-201ENST00000406588 507 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 POLHP1-201ENST00000411806 470 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 NDUFB4P5-201ENST00000415445 361 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 RAC1P3-201ENST00000416129 580 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC087650.1-201ENST00000431445 468 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC6A4P31645 GOT2P5-201ENST00000433995 546 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 NDUFA5P4-201ENST00000436704 385 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 SCARNA18-201ENST00000459004 134 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 CCDC34P1-201ENST00000507441 517 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC6A4P31645 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC6A4P31645 RNU6-864P-201ENST00000516256 108 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 RNU6-277P-201ENST00000516272 106 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 Vault.1-201ENST00000516474 102 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC6A4P31645 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC6A4P31645 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC6A4P31645 OR11H5P-201ENST00000554039 926 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms