Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RPL37P6-202ENST00000464216 403 ntBASIC1.25□□□□□ -2.21
CPS1P31327 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 AL031775.1-201ENST00000607014 887 ntBASIC1.25□□□□□ -2.21
CPS1P31327 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CPS1P31327 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CPS1P31327 OR4G2P-201ENST00000328113 903 ntBASIC1.25□□□□□ -2.21
CPS1P31327 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.25□□□□□ -2.21
CPS1P31327 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.25□□□□□ -2.21
CPS1P31327 CENPUP2-201ENST00000555897 1186 ntBASIC1.25□□□□□ -2.21
CPS1P31327 MTND4P12-201ENST00000498999 1377 ntBASIC1.24□□□□□ -2.21
CPS1P31327 AC093155.1-201ENST00000440164 826 ntBASIC1.24□□□□□ -2.21
CPS1P31327 RPS29P28-201ENST00000446439 141 ntBASIC1.24□□□□□ -2.21
CPS1P31327 AC010099.1-201ENST00000455434 375 ntBASIC1.24□□□□□ -2.21
CPS1P31327 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.24□□□□□ -2.21
CPS1P31327 MIR2909-201ENST00000617113 69 ntBASIC1.24□□□□□ -2.21
CPS1P31327 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CPS1P31327 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CPS1P31327 CIR1P3-201ENST00000405137 479 ntBASIC1.23□□□□□ -2.21
CPS1P31327 USP9YP33-201ENST00000412220 421 ntBASIC1.23□□□□□ -2.21
CPS1P31327 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.23□□□□□ -2.21
CPS1P31327 USP9YP35-201ENST00000435696 412 ntBASIC1.23□□□□□ -2.21
CPS1P31327 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.23□□□□□ -2.21
CPS1P31327 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.23□□□□□ -2.21
CPS1P31327 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.23□□□□□ -2.21
CPS1P31327 AC133485.1-201ENST00000567176 124 ntBASIC1.23□□□□□ -2.21
CPS1P31327 AC138907.6-201ENST00000568401 126 ntBASIC1.23□□□□□ -2.21
CPS1P31327 AL355297.2-201ENST00000604792 129 ntBASIC1.23□□□□□ -2.21
CPS1P31327 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.23□□□□□ -2.21
CPS1P31327 RNU6-115P-201ENST00000364310 107 ntBASIC1.22□□□□□ -2.21
CPS1P31327 RNU4-7P-201ENST00000364758 141 ntBASIC1.22□□□□□ -2.21
CPS1P31327 RNU6-1235P-201ENST00000384559 107 ntBASIC1.22□□□□□ -2.21
CPS1P31327 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.22□□□□□ -2.21
CPS1P31327 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.22□□□□□ -2.21
CPS1P31327 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CPS1P31327 AC079780.1-201ENST00000428259 207 ntBASIC1.22□□□□□ -2.21
CPS1P31327 FTH1P12-201ENST00000432137 551 ntBASIC1.22□□□□□ -2.21
CPS1P31327 AC118469.1-201ENST00000442943 488 ntBASIC1.22□□□□□ -2.21
CPS1P31327 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.22□□□□□ -2.21
CPS1P31327 RNU7-26P-201ENST00000458980 63 ntBASIC1.22□□□□□ -2.21
CPS1P31327 RNU6-498P-201ENST00000459468 107 ntBASIC1.22□□□□□ -2.21
CPS1P31327 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
CPS1P31327 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CPS1P31327 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CPS1P31327 AC005332.10-201ENST00000612725 619 ntBASIC1.22□□□□□ -2.21
CPS1P31327 AC004808.1-201ENST00000627671 721 ntBASIC1.22□□□□□ -2.21
CPS1P31327 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CPS1P31327 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CPS1P31327 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
CPS1P31327 RNA5SP450-201ENST00000411206 102 ntBASIC1.21□□□□□ -2.22
CPS1P31327 AL121769.1-201ENST00000469473 401 ntBASIC1.21□□□□□ -2.22
CPS1P31327 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.21□□□□□ -2.22
CPS1P31327 AC104806.1-201ENST00000508720 308 ntBASIC1.21□□□□□ -2.22
CPS1P31327 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CPS1P31327 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.21□□□□□ -2.22
CPS1P31327 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.21□□□□□ -2.22
CPS1P31327 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.21□□□□□ -2.22
CPS1P31327 RNU6-335P-201ENST00000364563 113 ntBASIC1.2□□□□□ -2.22
CPS1P31327 RNU2-41P-201ENST00000410991 178 ntBASIC1.2□□□□□ -2.22
CPS1P31327 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.2□□□□□ -2.22
CPS1P31327 AC013268.2-201ENST00000420753 337 ntBASIC1.2□□□□□ -2.22
CPS1P31327 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.2□□□□□ -2.22
CPS1P31327 AC018437.1-201ENST00000492214 406 ntBASIC1.2□□□□□ -2.22
CPS1P31327 AC026801.1-201ENST00000497178 464 ntBASIC1.2□□□□□ -2.22
CPS1P31327 MIR6086-201ENST00000638065 55 ntBASIC1.2□□□□□ -2.22
CPS1P31327 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.2□□□□□ -2.22
CPS1P31327 AC100821.1-201ENST00000523153 2479 ntBASIC1.2□□□□□ -2.22
CPS1P31327 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CPS1P31327 RNU6-35P-201ENST00000384530 107 ntBASIC1.2□□□□□ -2.22
CPS1P31327 AC016691.1-201ENST00000441321 413 ntBASIC1.2□□□□□ -2.22
CPS1P31327 RPL23AP33-201ENST00000442301 452 ntBASIC1.2□□□□□ -2.22
CPS1P31327 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.2□□□□□ -2.22
CPS1P31327 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.2□□□□□ -2.22
CPS1P31327 RN7SKP5-201ENST00000517045 272 ntBASIC1.2□□□□□ -2.22
CPS1P31327 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CPS1P31327 AL109918.3-201ENST00000603072 338 ntBASIC1.2□□□□□ -2.22
CPS1P31327 AL136363.1-201ENST00000605349 337 ntBASIC1.2□□□□□ -2.22
CPS1P31327 SNORD14A-201ENST00000606526 91 ntBASIC1.2□□□□□ -2.22
CPS1P31327 AC091304.6-201ENST00000619761 202 ntBASIC1.2□□□□□ -2.22
CPS1P31327 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CPS1P31327 NACAP2-201ENST00000318548 624 ntBASIC1.19□□□□□ -2.22
CPS1P31327 Y_RNA.294-201ENST00000364916 102 ntBASIC1.19□□□□□ -2.22
CPS1P31327 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CPS1P31327 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CPS1P31327 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.19□□□□□ -2.22
CPS1P31327 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
CPS1P31327 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
CPS1P31327 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.19□□□□□ -2.22
CPS1P31327 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.19□□□□□ -2.22
CPS1P31327 AC003001.2-201ENST00000616294 831 ntBASIC1.19□□□□□ -2.22
CPS1P31327 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.19□□□□□ -2.22
CPS1P31327 AC008163.1-202ENST00000636004 2889 ntBASIC1.18□□□□□ -2.22
CPS1P31327 MIR1197-201ENST00000408818 88 ntBASIC1.18□□□□□ -2.22
CPS1P31327 AL356867.1-201ENST00000429623 299 ntBASIC1.18□□□□□ -2.22
CPS1P31327 PMCHL2-203ENST00000457791 237 ntBASIC1.18□□□□□ -2.22
CPS1P31327 AC110792.2-201ENST00000510278 224 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms