Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC8P31273 snoU109.1-201ENST00000459339 135 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 RPS20P20-201ENST00000460498 340 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 RPL21P8-201ENST00000465083 535 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC8P31273 RPL9P33-201ENST00000484311 566 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AC112204.1-201ENST00000502591 103 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC8P31273 RNA5SP367-201ENST00000516557 118 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 MTND1P5-201ENST00000517906 940 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXC8P31273 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC8P31273 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXC8P31273 AC016957.1-201ENST00000534895 309 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 OR4H12P-201ENST00000556269 907 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC8P31273 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC8P31273 RMST_8.1-201ENST00000610287 165 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AC138749.5-201ENST00000611461 208 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AC116165.2-201ENST00000616705 206 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC8P31273 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC8P31273 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXC8P31273 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC8P31273 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC8P31273 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC8P31273 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXC8P31273 SNORA36C-201ENST00000384289 132 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXC8P31273 TXNP7-201ENST00000406296 293 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 RPS3AP3-201ENST00000411933 242 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 MTCO3P30-201ENST00000426425 670 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 OR2B8P-201ENST00000432841 938 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC8P31273 AC105272.1-201ENST00000438604 198 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC8P31273 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC8P31273 AC092798.1-201ENST00000458542 409 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC8P31273 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC8P31273 OR5G4P-201ENST00000525251 760 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC8P31273 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 AP001094.1-201ENST00000579805 193 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC8P31273 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC8P31273 AC004908.2-201ENST00000609090 574 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AC091834.1-201ENST00000614543 472 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AC108479.2-201ENST00000617314 601 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AC068137.3-201ENST00000639191 341 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 AC073869.6-201ENST00000640656 341 ntBASIC3.3□□□□□ -1.88
HOXC8P31273 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC8P31273 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC8P31273 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC8P31273 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 AL138713.1-201ENST00000624026 2130 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC092125.1-201ENST00000562568 1995 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC233263.6-201ENST00000631132 1963 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
HOXC8P31273 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 RNU6-259P-201ENST00000383999 107 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC8P31273 UBE2FP1-201ENST00000416536 447 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AL645937.1-202ENST00000421799 937 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 C8orf59P1-201ENST00000429930 303 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC8P31273 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC8P31273 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC8P31273 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AL031183.1-201ENST00000457667 207 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC8P31273 AC104472.2-201ENST00000469035 601 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 RN7SL20P-201ENST00000488827 297 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC135721.1-201ENST00000497954 479 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC107401.1-201ENST00000503426 685 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC8P31273 RNU6-1256P-201ENST00000516539 103 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 SNORA18.6-201ENST00000516792 115 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 RN7SKP272-201ENST00000516988 232 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 RNA5SP291-201ENST00000517222 105 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC8P31273 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC8P31273 RPL21P5-201ENST00000554662 472 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AL157394.1-201ENST00000562983 1224 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC8P31273 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC8P31273 AF038458.1-201ENST00000588406 262 ntBASIC3.29□□□□□ -1.88
HOXC8P31273 AC090578.1-201ENST00000604955 591 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms