Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MIR3682-201ENST00000581338 84 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXA13P31271 AC080078.2-201ENST00000603766 501 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AL136363.2-201ENST00000604173 851 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 Z99129.1-201ENST00000612510 255 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AC008498.1-201ENST00000613012 531 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 uc_338.12-201ENST00000616344 181 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AL603839.4-201ENST00000624658 1005 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXA13P31271 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 AL035425.3-201ENST00000564206 4996 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 AC090740.1-201ENST00000623193 2262 ntBASIC3.36□□□□□ -1.87
HOXA13P31271 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXA13P31271 AL021368.2-201ENST00000606125 5352 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXA13P31271 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA13P31271 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA13P31271 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HOXA13P31271 Y_RNA.111-201ENST00000363248 100 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 U3.11-201ENST00000364476 212 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 Y_RNA.516-201ENST00000384541 124 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AC127391.1-201ENST00000411737 98 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA13P31271 ELOCP4-201ENST00000420090 333 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 ISCA1P6-201ENST00000427740 390 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 AC093156.1-201ENST00000440382 670 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA13P31271 RPL30P14-201ENST00000482744 348 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 TTC39CP1-201ENST00000512513 755 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 RNU6-720P-201ENST00000516363 108 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA13P31271 AP003122.4-201ENST00000530980 758 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA13P31271 DPPA3P3-201ENST00000603842 430 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AC131902.3-201ENST00000611767 581 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 MIR7106-201ENST00000612419 65 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AL133173.2-201ENST00000614270 90 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA13P31271 AC099654.13-201ENST00000639774 207 ntBASIC3.35□□□□□ -1.87
HOXA13P31271 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA13P31271 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA13P31271 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 RNU6-7-201ENST00000364784 107 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 RNU6-8-201ENST00000365467 107 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 RPS3AP36-201ENST00000398190 775 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 RNA5SP274-201ENST00000410484 108 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.34□□□□□ -1.87
HOXA13P31271 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA13P31271 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HOXA13P31271 AC007283.2-201ENST00000424739 197 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA13P31271 ARPC3P1-201ENST00000437218 533 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 MTND6P13-201ENST00000443510 523 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 HMGB3P8-201ENST00000449709 577 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA13P31271 RNU6-405P-201ENST00000516637 110 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC011979.2-201ENST00000527568 352 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC128657.1-201ENST00000549459 145 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA13P31271 AC010546.1-201ENST00000569391 485 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 MIR3913-1-201ENST00000577744 102 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 MIR4528-201ENST00000577763 90 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA13P31271 MIR4293-201ENST00000584305 78 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC079089.3-201ENST00000603094 673 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC013553.2-201ENST00000604244 589 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AL161734.1-201ENST00000609720 557 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AP001506.1-201ENST00000615444 211 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC090132.2-201ENST00000615881 347 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 AC006111.3-201ENST00000622137 383 ntBASIC3.34□□□□□ -1.87
HOXA13P31271 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA13P31271 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA13P31271 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HOXA13P31271 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXA13P31271 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXA13P31271 FAM35BP-202ENST00000497389 3337 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 RNU5E-1-201ENST00000362477 120 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 RNU6-248P-201ENST00000410720 107 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 RNU6-195P-201ENST00000411352 109 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AL592148.1-201ENST00000413568 445 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 HMGB3P23-201ENST00000414981 585 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC245054.2-201ENST00000415639 319 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 NDUFB4P7-201ENST00000423198 363 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA13P31271 AC137499.1-201ENST00000427602 88 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC010975.2-201ENST00000427781 588 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA13P31271 FCF1P1-201ENST00000432690 571 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms