Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HOXA10P31260 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA10P31260 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA10P31260 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA10P31260 EOGT-210ENST00000615922 1931 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA10P31260 RNU6-1287P-201ENST00000362914 107 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 Y_RNA.270-201ENST00000364693 104 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 RNU6-187P-201ENST00000384139 106 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 Y_RNA.462-201ENST00000384268 102 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 RNU6-1060P-201ENST00000384664 107 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 Y_RNA.576-201ENST00000384781 102 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HOXA10P31260 DSTNP4-201ENST00000399472 474 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AL024474.1-201ENST00000404655 591 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 GSTM3P2-201ENST00000412746 530 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA10P31260 AL358472.1-201ENST00000431295 329 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA10P31260 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.04□□□□□ -1.6
HOXA10P31260 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA10P31260 AC073587.1-201ENST00000447093 876 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 FTH1P25-201ENST00000447665 469 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 RPS15AP27-201ENST00000449183 343 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 RPS11P1-201ENST00000451072 473 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA10P31260 AC133473.1-201ENST00000455173 299 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 SCARNA18-201ENST00000459004 134 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AC093852.1-201ENST00000503587 266 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 SNORA40.14-201ENST00000516543 86 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 HSPE1P20-201ENST00000538133 289 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AC090115.3-201ENST00000553218 849 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AC068446.3-201ENST00000555285 382 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA10P31260 MIR548AI-201ENST00000579940 88 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 COX6CP3-201ENST00000580869 223 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 MIR5692C1-201ENST00000585309 91 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA10P31260 HMGB1P50-201ENST00000605814 607 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA10P31260 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
HOXA10P31260 AC103710.2-202ENST00000641454 2853 ntBASIC5.04□□□□□ -1.6
HOXA10P31260 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA10P31260 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA10P31260 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA10P31260 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA10P31260 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA10P31260 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 Y_RNA.333-201ENST00000365274 102 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 RNA5SP22-201ENST00000365393 109 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 RNU6-1127P-201ENST00000384580 107 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 U8.11-201ENST00000384699 133 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 U8.12-201ENST00000384701 133 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 SNORA11.2-201ENST00000408318 127 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 RNU6-387P-201ENST00000411331 105 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA10P31260 ELOCP20-201ENST00000422460 345 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 MRPS18CP6-201ENST00000423587 223 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 RPL23AP69-201ENST00000431134 458 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA10P31260 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 AC011816.1-201ENST00000441346 546 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA10P31260 AL359672.1-201ENST00000442302 409 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 AC243772.1-201ENST00000451620 410 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 U8.18-201ENST00000459285 133 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 AC108145.1-201ENST00000503770 153 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 AC104806.1-201ENST00000508720 308 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA10P31260 RNU6-1069P-201ENST00000516612 133 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 RN7SKP96-201ENST00000516948 297 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 AC026403.1-201ENST00000518938 295 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 CYCSP30-201ENST00000546447 172 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 HSPE1P14-201ENST00000605812 302 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 AC004792.1-201ENST00000614523 137 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 FP236240.3-201ENST00000623061 327 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA10P31260 AL445437.1-201ENST00000623157 3087 ntBASIC5.03□□□□□ -1.6
HOXA10P31260 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXA10P31260 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.03□□□□□ -1.6
HOXA10P31260 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA10P31260 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA10P31260 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA10P31260 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA10P31260 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA10P31260 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms