Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MTCO2P25-201ENST00000447065 681 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 RPL21P134-201ENST00000453468 483 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 USP9YP25-201ENST00000457708 443 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 MEMO1P3-201ENST00000459811 302 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 MTND1P16-201ENST00000465177 898 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 MIR892C-201ENST00000516410 77 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC021269.2-201ENST00000532318 330 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 OR11H5P-201ENST00000554039 926 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DMAP28067 MIR3199-1-201ENST00000582434 88 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AL021997.1-201ENST00000605757 193 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC080013.3-201ENST00000606839 578 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AL589743.7-201ENST00000612637 233 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AL442067.2-201ENST00000614033 363 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC010678.1-201ENST00000614118 713 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 MIR6766-201ENST00000622641 72 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AP002791.1-201ENST00000623291 381 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AL445984.1-201ENST00000637834 659 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC131280.1-202ENST00000624067 4211 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DMAP28067 GNG5P1-201ENST00000255500 204 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 FTLP6-201ENST00000355274 422 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 RNU6-1078P-201ENST00000364522 103 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 RNU6-744P-201ENST00000365557 107 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 RNU6-1316P-201ENST00000384242 108 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 MIR34A-201ENST00000385130 110 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL109755.1-201ENST00000401791 649 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL356421.1-201ENST00000403255 413 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 RNA5SP270-201ENST00000411361 118 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 USP9YP33-201ENST00000412220 421 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 USP9YP35-201ENST00000435696 412 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 RPS20P20-201ENST00000460498 340 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 RPS20P22-201ENST00000473700 357 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC080014.1-201ENST00000496877 1201 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 SLC25A15P5-201ENST00000508033 253 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 SNORA70.24-201ENST00000517233 118 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 OR5AQ1P-201ENST00000527596 927 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL353997.4-201ENST00000586196 166 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AP000403.1-201ENST00000603349 851 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 SDR42E1P2-201ENST00000614861 481 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 SDR42E1P4-201ENST00000620894 481 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AC025048.6-202ENST00000627667 438 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 AL390862.1-201ENST00000635467 1469 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DMAP28067 KPNA2P1-201ENST00000458289 1591 ntBASIC1.92□□□□□ -2.1
HLA-DMAP28067 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DMAP28067 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
HLA-DMAP28067 MTND4P9-201ENST00000507819 1346 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DMAP28067 RNU6-97P-201ENST00000363387 104 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 SNORA23-201ENST00000365128 182 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 RNU6-637P-201ENST00000384050 107 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 Y_RNA.465-201ENST00000384293 102 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 HMGB1P11-201ENST00000413899 637 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 MTCYBP38-201ENST00000417160 1123 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 MED14P1-201ENST00000430517 648 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DMAP28067 ATG12P2-201ENST00000456830 416 ntBASIC1.91□□□□□ -2.1
HLA-DMAP28067 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms