Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MIR3199-2-201ENST00000636243 86 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A3P25940 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A3P25940 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL5A3P25940 RNU6-1249P-201ENST00000363237 111 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 DSTNP4-201ENST00000399472 474 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 RNU6-584P-201ENST00000410350 95 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 BTF3P8-201ENST00000414577 526 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 SFR1P2-201ENST00000421841 730 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC013410.2-201ENST00000422627 201 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AL354692.1-201ENST00000423044 315 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 HMGN2P30-201ENST00000423237 256 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A3P25940 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A3P25940 HMGN1P33-201ENST00000432945 451 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A3P25940 ARF4P4-201ENST00000439608 520 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A3P25940 AL050341.1-201ENST00000447743 313 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 SNORD121B-201ENST00000458838 81 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC104164.3-201ENST00000467363 1258 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A3P25940 RPL23AP41-201ENST00000484754 458 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC004062.1-201ENST00000509926 645 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A3P25940 RNU6-276P-201ENST00000516114 96 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 RNU6-1028P-201ENST00000517164 93 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC091163.3-201ENST00000518269 1144 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A3P25940 NDUFS5P6-201ENST00000529136 295 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 MIR3912-201ENST00000577566 105 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A3P25940 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A3P25940 AC091057.3-201ENST00000602684 733 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AP003973.1-201ENST00000604639 691 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC097504.2-201ENST00000608088 454 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC024933.1-201ENST00000608472 348 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC104763.3-201ENST00000613765 618 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 AC022960.3-201ENST00000619794 441 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.77□□□□□ -2.13
COL5A3P25940 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A3P25940 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A3P25940 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL5A3P25940 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL5A3P25940 Y_RNA.36-201ENST00000362602 112 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 RNU6-925P-201ENST00000384629 104 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AL356057.2-201ENST00000403318 432 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 RPL7P27-201ENST00000403775 720 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 RNU6-1077P-201ENST00000410506 102 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AL133384.1-201ENST00000412744 351 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 MTND4P3-201ENST00000417829 541 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A3P25940 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A3P25940 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A3P25940 RAB11AP1-201ENST00000442978 646 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 HMGN2P18-201ENST00000450680 270 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 COX6CP14-201ENST00000469580 174 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.76□□□□□ -2.13
COL5A3P25940 AC084024.2-201ENST00000503480 791 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A3P25940 AC119751.4-201ENST00000507498 357 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AC008526.1-201ENST00000509149 338 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AC048346.1-201ENST00000510247 144 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL5A3P25940 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL5A3P25940 RN7SKP49-201ENST00000516675 260 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 HIGD1AP6-201ENST00000521833 279 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 SUB1P1-201ENST00000524415 382 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A3P25940 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A3P25940 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL5A3P25940 NBEAP1-201ENST00000554452 979 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 AC023824.3-201ENST00000569003 562 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 MIR5194-201ENST00000582634 120 ntBASIC1.76□□□□□ -2.13
COL5A3P25940 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
COL5A3P25940 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.76□□□□□ -2.13
COL5A3P25940 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL5A3P25940 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL5A3P25940 RNU6-50P-201ENST00000362356 103 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 RNU6-251P-201ENST00000363235 104 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 OR1L1-202ENST00000373686 1083 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 MIR144-201ENST00000384886 86 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 AL023807.1-201ENST00000407932 359 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 MTCO2P23-201ENST00000425216 680 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 SNRPEP4-201ENST00000435815 279 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 EXOSC3P1-201ENST00000448649 500 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 AC244505.3-201ENST00000454598 187 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 snoU13.3-201ENST00000459441 104 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL5A3P25940 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A3P25940 AC118282.2-201ENST00000508739 374 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 MTATP6P9-201ENST00000515039 680 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 MTCYBP41-201ENST00000528913 1123 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.75□□□□□ -2.13
COL5A3P25940 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.75□□□□□ -2.13
COL5A3P25940 AC125611.2-201ENST00000551907 647 ntBASIC1.75□□□□□ -2.13
COL5A3P25940 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A3P25940 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A3P25940 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A3P25940 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms