Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-777P-201ENST00000364265 104 ntBASIC2.09□□□□□ -2.07
USF1P22415 RNU6-853P-201ENST00000364306 107 ntBASIC2.09□□□□□ -2.07
USF1P22415 SNORD116.1-201ENST00000365628 92 ntBASIC2.09□□□□□ -2.07
USF1P22415 MIR504-201ENST00000385065 83 ntBASIC2.09□□□□□ -2.07
USF1P22415 RNU2-49P-201ENST00000410666 184 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.09□□□□□ -2.07
USF1P22415 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.09□□□□□ -2.07
USF1P22415 USP12PX-201ENST00000432383 1057 ntBASIC2.09□□□□□ -2.07
USF1P22415 RPS12P2-201ENST00000439728 269 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.09□□□□□ -2.07
USF1P22415 OSTCP8-201ENST00000445117 448 ntBASIC2.09□□□□□ -2.07
USF1P22415 TPT1P14-201ENST00000448018 505 ntBASIC2.09□□□□□ -2.07
USF1P22415 AL353705.4-201ENST00000449661 238 ntBASIC2.09□□□□□ -2.07
USF1P22415 FDX1P2-201ENST00000450769 375 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC233279.1-201ENST00000455300 423 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.09□□□□□ -2.07
USF1P22415 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
USF1P22415 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.09□□□□□ -2.07
USF1P22415 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.09□□□□□ -2.07
USF1P22415 AC022447.1-201ENST00000515358 464 ntBASIC2.09□□□□□ -2.07
USF1P22415 RNU6-927P-201ENST00000516199 100 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.09□□□□□ -2.07
USF1P22415 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.09□□□□□ -2.07
USF1P22415 AC123904.3-201ENST00000547218 814 ntBASIC2.09□□□□□ -2.07
USF1P22415 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.09□□□□□ -2.07
USF1P22415 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.09□□□□□ -2.07
USF1P22415 UBE2L4-201ENST00000587688 464 ntBASIC2.09□□□□□ -2.07
USF1P22415 AL356280.1-201ENST00000603614 379 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC104237.2-201ENST00000612456 443 ntBASIC2.09□□□□□ -2.07
USF1P22415 MIR7843-201ENST00000622274 79 ntBASIC2.09□□□□□ -2.07
USF1P22415 AL158801.5-201ENST00000623123 465 ntBASIC2.09□□□□□ -2.07
USF1P22415 AC068057.2-201ENST00000624047 895 ntBASIC2.09□□□□□ -2.07
USF1P22415 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
USF1P22415 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
USF1P22415 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.09□□□□□ -2.08
USF1P22415 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.09□□□□□ -2.08
USF1P22415 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.08□□□□□ -2.08
USF1P22415 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USF1P22415 RNU6-1072P-201ENST00000384703 107 ntBASIC2.08□□□□□ -2.08
USF1P22415 RNU6-443P-201ENST00000384780 107 ntBASIC2.08□□□□□ -2.08
USF1P22415 MIR518C-201ENST00000384822 101 ntBASIC2.08□□□□□ -2.08
USF1P22415 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USF1P22415 AL359511.1-201ENST00000402970 211 ntBASIC2.08□□□□□ -2.08
USF1P22415 AL355143.1-201ENST00000407101 841 ntBASIC2.08□□□□□ -2.08
USF1P22415 MIR320C1-201ENST00000408566 88 ntBASIC2.08□□□□□ -2.08
USF1P22415 MTCO1P17-201ENST00000411522 491 ntBASIC2.08□□□□□ -2.08
USF1P22415 AC096649.2-201ENST00000416186 393 ntBASIC2.08□□□□□ -2.08
USF1P22415 AC083875.1-201ENST00000419509 405 ntBASIC2.08□□□□□ -2.08
USF1P22415 USP9YP26-201ENST00000421008 661 ntBASIC2.08□□□□□ -2.08
USF1P22415 BPY2DP-201ENST00000422208 265 ntBASIC2.08□□□□□ -2.08
USF1P22415 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.08□□□□□ -2.08
USF1P22415 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.08□□□□□ -2.08
USF1P22415 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.08□□□□□ -2.08
USF1P22415 SNRPEP9-201ENST00000436794 238 ntBASIC2.08□□□□□ -2.08
USF1P22415 MTCO1P27-201ENST00000448269 226 ntBASIC2.08□□□□□ -2.08
USF1P22415 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.08□□□□□ -2.08
USF1P22415 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.08□□□□□ -2.08
USF1P22415 AC005410.1-202ENST00000460347 485 ntBASIC2.08□□□□□ -2.08
USF1P22415 RBM43P1-201ENST00000476891 1081 ntBASIC2.08□□□□□ -2.08
USF1P22415 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
USF1P22415 MTND5P13-201ENST00000513046 1079 ntBASIC2.08□□□□□ -2.08
USF1P22415 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.08□□□□□ -2.08
USF1P22415 RNU5F-8P-201ENST00000515941 111 ntBASIC2.08□□□□□ -2.08
USF1P22415 RNU6-390P-201ENST00000516259 103 ntBASIC2.08□□□□□ -2.08
USF1P22415 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
USF1P22415 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.08□□□□□ -2.08
USF1P22415 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 OR5BN1P-201ENST00000532955 829 ntBASIC2.08□□□□□ -2.08
USF1P22415 AP000873.5-201ENST00000533906 236 ntBASIC2.08□□□□□ -2.08
USF1P22415 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USF1P22415 AC007115.1-201ENST00000546853 234 ntBASIC2.08□□□□□ -2.08
USF1P22415 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.08□□□□□ -2.08
USF1P22415 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.08□□□□□ -2.08
USF1P22415 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.08□□□□□ -2.08
USF1P22415 AL596327.1-201ENST00000603629 213 ntBASIC2.08□□□□□ -2.08
USF1P22415 AC006386.1-201ENST00000619436 415 ntBASIC2.08□□□□□ -2.08
USF1P22415 AP000676.3-201ENST00000623299 569 ntBASIC2.08□□□□□ -2.08
USF1P22415 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USF1P22415 AC010329.5-201ENST00000623497 2174 ntBASIC2.08□□□□□ -2.08
USF1P22415 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USF1P22415 RNU6-462P-201ENST00000362659 105 ntBASIC2.07□□□□□ -2.08
USF1P22415 Y_RNA.245-201ENST00000364493 95 ntBASIC2.07□□□□□ -2.08
USF1P22415 RNU4-22P-201ENST00000411058 166 ntBASIC2.07□□□□□ -2.08
USF1P22415 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.07□□□□□ -2.08
USF1P22415 NDUFS5P4-201ENST00000412983 318 ntBASIC2.07□□□□□ -2.08
USF1P22415 RPL17P12-201ENST00000413391 526 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.07□□□□□ -2.08
USF1P22415 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USF1P22415 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 ELOCP14-201ENST00000428070 331 ntBASIC2.07□□□□□ -2.08
USF1P22415 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms