Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR5J1P-201ENST00000313544 939 ntBASIC3.05□□□□□ -1.92
CDH3P22223 Y_RNA.559-201ENST00000384686 107 ntBASIC3.05□□□□□ -1.92
CDH3P22223 MIR128-1-201ENST00000384921 82 ntBASIC3.05□□□□□ -1.92
CDH3P22223 MIR514A1-201ENST00000385133 98 ntBASIC3.05□□□□□ -1.92
CDH3P22223 RNU6-278P-201ENST00000390945 109 ntBASIC3.05□□□□□ -1.92
CDH3P22223 RNA5SP252-201ENST00000391131 119 ntBASIC3.05□□□□□ -1.92
CDH3P22223 RPL23AP32-201ENST00000395315 459 ntBASIC3.05□□□□□ -1.92
CDH3P22223 MRPL42P2-201ENST00000403169 426 ntBASIC3.05□□□□□ -1.92
CDH3P22223 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH3P22223 RN7SKP220-201ENST00000410611 288 ntBASIC3.05□□□□□ -1.92
CDH3P22223 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH3P22223 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH3P22223 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH3P22223 AC018630.2-202ENST00000422992 927 ntBASIC3.05□□□□□ -1.92
CDH3P22223 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.05□□□□□ -1.92
CDH3P22223 DLGAP5P1-201ENST00000430307 464 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH3P22223 AC104850.1-201ENST00000435940 476 ntBASIC3.05□□□□□ -1.92
CDH3P22223 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.05□□□□□ -1.92
CDH3P22223 RPS24P1-201ENST00000438550 371 ntBASIC3.05□□□□□ -1.92
CDH3P22223 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH3P22223 AC016696.1-201ENST00000446949 318 ntBASIC3.05□□□□□ -1.92
CDH3P22223 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH3P22223 ELOCP23-201ENST00000452014 332 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AL590639.1-201ENST00000456484 337 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH3P22223 KLF3P2-201ENST00000465138 268 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC010631.1-201ENST00000474150 156 ntBASIC3.05□□□□□ -1.92
CDH3P22223 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH3P22223 AL049874.1-201ENST00000489560 388 ntBASIC3.05□□□□□ -1.92
CDH3P22223 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH3P22223 AC009901.1-201ENST00000506703 541 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC100870.1-201ENST00000522035 505 ntBASIC3.05□□□□□ -1.92
CDH3P22223 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH3P22223 FAM60DP-201ENST00000524174 632 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH3P22223 MIR3921-201ENST00000577308 85 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
CDH3P22223 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH3P22223 AP000254.1-201ENST00000609934 520 ntBASIC3.05□□□□□ -1.92
CDH3P22223 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH3P22223 AC006338.1-201ENST00000618453 749 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC099506.2-201ENST00000623074 221 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC110994.2-201ENST00000635481 492 ntBASIC3.05□□□□□ -1.92
CDH3P22223 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.05□□□□□ -1.92
CDH3P22223 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH3P22223 FARSBP1-201ENST00000435808 1778 ntBASIC3.05□□□□□ -1.92
CDH3P22223 OR4G2P-202ENST00000641004 1759 ntBASIC3.05□□□□□ -1.92
CDH3P22223 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
CDH3P22223 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDH3P22223 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH3P22223 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH3P22223 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH3P22223 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH3P22223 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH3P22223 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDH3P22223 SDAD1P2-201ENST00000441308 2028 ntBASIC3.04□□□□□ -1.92
CDH3P22223 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH3P22223 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH3P22223 RNU6-511P-201ENST00000363496 107 ntBASIC3.04□□□□□ -1.92
CDH3P22223 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
CDH3P22223 SNORA48.2-201ENST00000390926 124 ntBASIC3.04□□□□□ -1.92
CDH3P22223 SNORA48.5-201ENST00000391143 135 ntBASIC3.04□□□□□ -1.92
CDH3P22223 RPS3AP36-201ENST00000398190 775 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AL359634.1-202ENST00000404721 284 ntBASIC3.04□□□□□ -1.92
CDH3P22223 TXNP7-201ENST00000406296 293 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH3P22223 Z92545.1-201ENST00000411782 234 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH3P22223 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH3P22223 AC008850.1-201ENST00000427546 362 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH3P22223 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH3P22223 USP9YP14-201ENST00000430663 563 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH3P22223 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
CDH3P22223 MTATP6P30-201ENST00000443540 664 ntBASIC3.04□□□□□ -1.92
CDH3P22223 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH3P22223 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH3P22223 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH3P22223 AL359273.1-201ENST00000510918 627 ntBASIC3.04□□□□□ -1.92
CDH3P22223 RNA5SP341-201ENST00000516261 117 ntBASIC3.04□□□□□ -1.92
CDH3P22223 RNU6-840P-201ENST00000517275 65 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH3P22223 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH3P22223 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH3P22223 AGGF1P4-201ENST00000568249 801 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH3P22223 AC012213.3-201ENST00000577199 777 ntBASIC3.04□□□□□ -1.92
CDH3P22223 MIR4325-201ENST00000583049 90 ntBASIC3.04□□□□□ -1.92
CDH3P22223 UBL5P2-201ENST00000583788 219 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH3P22223 AC008277.2-201ENST00000605196 797 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC005000.2-201ENST00000605468 310 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AP002826.1-201ENST00000608835 315 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC010133.1-201ENST00000615809 842 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC090132.2-201ENST00000615881 347 ntBASIC3.04□□□□□ -1.92
CDH3P22223 SNHG22-203ENST00000617833 660 ntBASIC3.04□□□□□ -1.92
CDH3P22223 AC002064.3-201ENST00000623448 346 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms