Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NRBF2P5-201ENST00000603087 788 ntBASIC2.59□□□□□ -1.99
XRCC1P18887 AC239868.4-201ENST00000608318 671 ntBASIC2.59□□□□□ -1.99
XRCC1P18887 SNHG22-203ENST00000617833 660 ntBASIC2.59□□□□□ -1.99
XRCC1P18887 AC092608.2-201ENST00000624427 218 ntBASIC2.59□□□□□ -1.99
XRCC1P18887 AL136360.1-201ENST00000503377 1900 ntBASIC2.59□□□□□ -1.99
XRCC1P18887 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
XRCC1P18887 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -2
XRCC1P18887 MTND4P16-201ENST00000466108 1367 ntBASIC2.59□□□□□ -2
XRCC1P18887 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
XRCC1P18887 RNU5A-2P-201ENST00000384337 116 ntBASIC2.58□□□□□ -2
XRCC1P18887 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
XRCC1P18887 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.58□□□□□ -2
XRCC1P18887 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.58□□□□□ -2
XRCC1P18887 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.58□□□□□ -2
XRCC1P18887 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.58□□□□□ -2
XRCC1P18887 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.58□□□□□ -2
XRCC1P18887 AC020550.1-201ENST00000447385 163 ntBASIC2.58□□□□□ -2
XRCC1P18887 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
XRCC1P18887 AC027673.1-201ENST00000456245 405 ntBASIC2.58□□□□□ -2
XRCC1P18887 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.58□□□□□ -2
XRCC1P18887 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.58□□□□□ -2
XRCC1P18887 LARP1BP2-201ENST00000486594 519 ntBASIC2.58□□□□□ -2
XRCC1P18887 AL160314.1-201ENST00000490836 438 ntBASIC2.58□□□□□ -2
XRCC1P18887 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.58□□□□□ -2
XRCC1P18887 RNU6-927P-201ENST00000516199 100 ntBASIC2.58□□□□□ -2
XRCC1P18887 RNU6-390P-201ENST00000516259 103 ntBASIC2.58□□□□□ -2
XRCC1P18887 RNA5SP282-201ENST00000516355 108 ntBASIC2.58□□□□□ -2
XRCC1P18887 AC123904.3-201ENST00000547218 814 ntBASIC2.58□□□□□ -2
XRCC1P18887 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.58□□□□□ -2
XRCC1P18887 AC020895.1-201ENST00000595362 272 ntBASIC2.58□□□□□ -2
XRCC1P18887 AL136363.1-201ENST00000605349 337 ntBASIC2.58□□□□□ -2
XRCC1P18887 AC107214.2-201ENST00000608204 634 ntBASIC2.58□□□□□ -2
XRCC1P18887 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.58□□□□□ -2
XRCC1P18887 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
XRCC1P18887 AC068880.5-201ENST00000624331 290 ntBASIC2.58□□□□□ -2
XRCC1P18887 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.58□□□□□ -2
XRCC1P18887 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
XRCC1P18887 PABPC1P9-201ENST00000426076 1612 ntBASIC2.57□□□□□ -2
XRCC1P18887 RNU1-105P-201ENST00000363470 161 ntBASIC2.57□□□□□ -2
XRCC1P18887 RNA5SP68-201ENST00000363885 119 ntBASIC2.57□□□□□ -2
XRCC1P18887 RNU5A-8P-201ENST00000364102 114 ntBASIC2.57□□□□□ -2
XRCC1P18887 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
XRCC1P18887 RNU2-25P-201ENST00000411041 191 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC099548.1-201ENST00000421443 426 ntBASIC2.57□□□□□ -2
XRCC1P18887 RPS27AP14-201ENST00000422868 454 ntBASIC2.57□□□□□ -2
XRCC1P18887 ZNF863P-201ENST00000426746 417 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC007919.1-201ENST00000429380 217 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.57□□□□□ -2
XRCC1P18887 RPL37P21-201ENST00000435890 276 ntBASIC2.57□□□□□ -2
XRCC1P18887 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.57□□□□□ -2
XRCC1P18887 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.57□□□□□ -2
XRCC1P18887 AC005094.1-201ENST00000440420 368 ntBASIC2.57□□□□□ -2
XRCC1P18887 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.57□□□□□ -2
XRCC1P18887 AC087588.1-201ENST00000462203 316 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC133134.1-201ENST00000466800 359 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC010631.1-201ENST00000474150 156 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.57□□□□□ -2
XRCC1P18887 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.57□□□□□ -2
XRCC1P18887 MTND5P13-201ENST00000513046 1079 ntBASIC2.57□□□□□ -2
XRCC1P18887 RNU4-29P-201ENST00000515943 174 ntBASIC2.57□□□□□ -2
XRCC1P18887 RNU6-1003P-201ENST00000517099 105 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.57□□□□□ -2
XRCC1P18887 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.57□□□□□ -2
XRCC1P18887 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.57□□□□□ -2
XRCC1P18887 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
XRCC1P18887 U73023.1-201ENST00000603134 700 ntBASIC2.57□□□□□ -2
XRCC1P18887 AC034229.4-201ENST00000607861 441 ntBASIC2.57□□□□□ -2
XRCC1P18887 OR10AB1P-201ENST00000609613 938 ntBASIC2.57□□□□□ -2
XRCC1P18887 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.56□□□□□ -2
XRCC1P18887 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
XRCC1P18887 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.56□□□□□ -2
XRCC1P18887 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
XRCC1P18887 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.56□□□□□ -2
XRCC1P18887 RPLP0P7-201ENST00000416050 667 ntBASIC2.56□□□□□ -2
XRCC1P18887 VPS26BP1-201ENST00000417155 755 ntBASIC2.56□□□□□ -2
XRCC1P18887 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.56□□□□□ -2
XRCC1P18887 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.56□□□□□ -2
XRCC1P18887 AL365496.1-201ENST00000426885 215 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC244035.1-201ENST00000430042 390 ntBASIC2.56□□□□□ -2
XRCC1P18887 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.56□□□□□ -2
XRCC1P18887 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.56□□□□□ -2
XRCC1P18887 OR6C5P-201ENST00000452388 923 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC138853.1-201ENST00000503549 823 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.56□□□□□ -2
XRCC1P18887 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.56□□□□□ -2
XRCC1P18887 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.56□□□□□ -2
XRCC1P18887 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.56□□□□□ -2
XRCC1P18887 AC025881.1-201ENST00000518851 512 ntBASIC2.56□□□□□ -2
XRCC1P18887 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.56□□□□□ -2
XRCC1P18887 DEFB108A-201ENST00000530110 222 ntBASIC2.56□□□□□ -2
XRCC1P18887 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.56□□□□□ -2
XRCC1P18887 AC007115.1-201ENST00000546853 234 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.56□□□□□ -2
XRCC1P18887 AC128657.1-201ENST00000549459 145 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC009094.1-201ENST00000564443 426 ntBASIC2.56□□□□□ -2
XRCC1P18887 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.56□□□□□ -2
XRCC1P18887 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.56□□□□□ -2
XRCC1P18887 AP000403.1-201ENST00000603349 851 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC090970.3-201ENST00000612566 866 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms