Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGA1P17096 AC090666.1-201ENST00000578241 445 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 MIR3199-1-201ENST00000582434 88 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 DPRXP5-201ENST00000604662 539 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 AL445493.3-201ENST00000619568 477 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 MIR7515-201ENST00000637837 67 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 MIR493-201ENST00000385254 89 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGA1P17096 Z77249.1-201ENST00000444622 1175 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGA1P17096 AC006390.1-201ENST00000508068 283 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HMGA1P17096 CBX3P8-201ENST00000532412 525 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGA1P17096 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.95□□□□□ -2.26
HMGA1P17096 MIR151B-201ENST00000584249 96 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 AL713998.2-201ENST00000604538 1198 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 AC007038.2-201ENST00000608095 740 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
HMGA1P17096 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.95□□□□□ -2.26
HMGA1P17096 AC025263.3-201ENST00000622965 1396 ntBASIC0.95□□□□□ -2.26
HMGA1P17096 Y_RNA.354-201ENST00000365448 111 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 RNU4-78P-201ENST00000410940 126 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGA1P17096 CYCSP48-201ENST00000417124 323 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGA1P17096 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGA1P17096 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGA1P17096 AC096920.1-201ENST00000423991 241 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC079780.1-201ENST00000428259 207 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGA1P17096 AL022238.1-201ENST00000442557 355 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 RPL23AP3-201ENST00000453844 468 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 Z82190.1-201ENST00000454534 490 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC108059.3-201ENST00000456388 214 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGA1P17096 PNPLA4P1-201ENST00000458328 305 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC087588.1-201ENST00000462203 316 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 DYNLL1P5-201ENST00000467158 270 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGA1P17096 RNA5SP445-201ENST00000515889 115 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC019176.1-201ENST00000518519 225 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGA1P17096 AC107954.1-201ENST00000565906 727 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC243960.4-201ENST00000600532 288 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 AC004852.3-201ENST00000614131 326 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMGA1P17096 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGA1P17096 AL512643.1-201ENST00000635735 524 ntBASIC0.94□□□□□ -2.26
HMGA1P17096 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.93□□□□□ -2.26
HMGA1P17096 MIR934-201ENST00000401241 83 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 HMGB3P31-201ENST00000413333 595 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC244453.4-201ENST00000419150 388 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGA1P17096 AC246680.2-201ENST00000422106 389 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC008850.1-201ENST00000427546 362 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC244035.1-201ENST00000430042 390 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 MTCYBP12-201ENST00000440559 1134 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC124916.1-201ENST00000444020 547 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGA1P17096 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGA1P17096 AC008379.1-201ENST00000463655 464 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC107032.1-201ENST00000485945 480 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 SUMO2P6-201ENST00000505273 288 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC108157.1-201ENST00000510511 539 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGA1P17096 RNU6-1223P-201ENST00000517124 104 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.93□□□□□ -2.26
HMGA1P17096 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGA1P17096 MIR3609-201ENST00000582661 80 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AC016727.2-201ENST00000603988 621 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 AP001485.1-201ENST00000604799 199 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HMGA1P17096 MIR6734-201ENST00000621166 68 ntBASIC0.93□□□□□ -2.26
HMGA1P17096 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGA1P17096 TEX21P-201ENST00000447107 1476 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 MIR26B-201ENST00000362251 77 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 RNU5D-1-201ENST00000363299 116 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 RNU6-1293P-201ENST00000384077 107 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 RNU6-198P-201ENST00000384258 104 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGA1P17096 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.92□□□□□ -2.26
HMGA1P17096 BX248409.1-201ENST00000455497 255 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGA1P17096 SNRPFP3-201ENST00000457792 225 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 AC112518.2-201ENST00000508565 425 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGA1P17096 SNORA31.8-201ENST00000516327 108 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.92□□□□□ -2.26
HMGA1P17096 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGA1P17096 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGA1P17096 AC025588.2-201ENST00000604851 466 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 AL355810.1-201ENST00000614629 552 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 RNU6-156P-201ENST00000621869 107 ntBASIC0.92□□□□□ -2.26
HMGA1P17096 RNU11-5P-201ENST00000391216 129 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGA1P17096 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.91□□□□□ -2.26
HMGA1P17096 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms