Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 C1DP3-201ENST00000455013 423 ntBASIC0.66□□□□□ -2.3
VCANP13611 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.66□□□□□ -2.3
VCANP13611 AC087045.1-201ENST00000605856 382 ntBASIC0.66□□□□□ -2.3
VCANP13611 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.66□□□□□ -2.3
VCANP13611 RNU6-185P-201ENST00000384421 107 ntBASIC0.66□□□□□ -2.3
VCANP13611 MIR1207-201ENST00000408249 87 ntBASIC0.66□□□□□ -2.3
VCANP13611 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.66□□□□□ -2.3
VCANP13611 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.66□□□□□ -2.3
VCANP13611 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.66□□□□□ -2.3
VCANP13611 Y_RNA.453-201ENST00000384223 109 ntBASIC0.66□□□□□ -2.3
VCANP13611 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.66□□□□□ -2.3
VCANP13611 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.66□□□□□ -2.3
VCANP13611 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.66□□□□□ -2.3
VCANP13611 AC080100.1-201ENST00000624239 5356 ntBASIC0.66□□□□□ -2.3
VCANP13611 SNORA63.3-201ENST00000362682 132 ntBASIC0.65□□□□□ -2.3
VCANP13611 U8.3-201ENST00000363321 132 ntBASIC0.65□□□□□ -2.3
VCANP13611 MIR153-2-201ENST00000385225 87 ntBASIC0.65□□□□□ -2.3
VCANP13611 AL591043.1-201ENST00000432461 424 ntBASIC0.65□□□□□ -2.3
VCANP13611 AP003355.1-201ENST00000518956 587 ntBASIC0.65□□□□□ -2.3
VCANP13611 AC091304.6-201ENST00000619761 202 ntBASIC0.65□□□□□ -2.3
VCANP13611 MIR203B-201ENST00000636080 86 ntBASIC0.65□□□□□ -2.3
VCANP13611 RNU6-146P-201ENST00000384602 108 ntBASIC0.65□□□□□ -2.31
VCANP13611 AC009296.1-201ENST00000443146 155 ntBASIC0.65□□□□□ -2.31
VCANP13611 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.65□□□□□ -2.31
VCANP13611 RNU1-104P-201ENST00000517280 175 ntBASIC0.65□□□□□ -2.31
VCANP13611 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.65□□□□□ -2.31
VCANP13611 AC073592.7-201ENST00000623659 507 ntBASIC0.65□□□□□ -2.31
VCANP13611 RNY4P24-201ENST00000362735 96 ntBASIC0.65□□□□□ -2.31
VCANP13611 SNORA8.3-201ENST00000384679 139 ntBASIC0.65□□□□□ -2.31
VCANP13611 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.64□□□□□ -2.31
VCANP13611 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.64□□□□□ -2.31
VCANP13611 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.64□□□□□ -2.31
VCANP13611 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.64□□□□□ -2.31
VCANP13611 AC240442.1-201ENST00000616055 283 ntBASIC0.64□□□□□ -2.31
VCANP13611 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.64□□□□□ -2.31
VCANP13611 AL356776.1-201ENST00000406574 447 ntBASIC0.64□□□□□ -2.31
VCANP13611 RNU2-37P-201ENST00000410695 177 ntBASIC0.64□□□□□ -2.31
VCANP13611 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.64□□□□□ -2.31
VCANP13611 SNRPEP4-201ENST00000435815 279 ntBASIC0.64□□□□□ -2.31
VCANP13611 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.64□□□□□ -2.31
VCANP13611 AC022880.1-201ENST00000534017 973 ntBASIC0.64□□□□□ -2.31
VCANP13611 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.64□□□□□ -2.31
VCANP13611 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VCANP13611 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.63□□□□□ -2.31
VCANP13611 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
VCANP13611 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.63□□□□□ -2.31
VCANP13611 AL589743.1-201ENST00000551932 2712 ntBASIC0.63□□□□□ -2.31
VCANP13611 RNA5SP295-201ENST00000362655 121 ntBASIC0.63□□□□□ -2.31
VCANP13611 AC068050.1-201ENST00000394891 380 ntBASIC0.63□□□□□ -2.31
VCANP13611 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.63□□□□□ -2.31
VCANP13611 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
VCANP13611 SNORA3.4-201ENST00000515969 96 ntBASIC0.63□□□□□ -2.31
VCANP13611 HSPE1P14-201ENST00000605812 302 ntBASIC0.63□□□□□ -2.31
VCANP13611 HAUS6P2-201ENST00000433254 2404 ntBASIC0.63□□□□□ -2.31
VCANP13611 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.63□□□□□ -2.31
VCANP13611 BX682237.1-201ENST00000415016 335 ntBASIC0.63□□□□□ -2.31
VCANP13611 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.63□□□□□ -2.31
VCANP13611 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
VCANP13611 AC073614.1-201ENST00000438690 650 ntBASIC0.63□□□□□ -2.31
VCANP13611 AC010625.1-201ENST00000511296 403 ntBASIC0.63□□□□□ -2.31
VCANP13611 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.63□□□□□ -2.31
VCANP13611 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.63□□□□□ -2.31
VCANP13611 ELOCP5-201ENST00000604924 333 ntBASIC0.63□□□□□ -2.31
VCANP13611 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.63□□□□□ -2.31
VCANP13611 SNORA67.1-201ENST00000364749 141 ntBASIC0.62□□□□□ -2.31
VCANP13611 MTND2P16-201ENST00000419987 799 ntBASIC0.62□□□□□ -2.31
VCANP13611 AC104308.1-201ENST00000454621 333 ntBASIC0.62□□□□□ -2.31
VCANP13611 AC109927.2-201ENST00000506416 303 ntBASIC0.62□□□□□ -2.31
VCANP13611 AC091812.1-201ENST00000432235 1948 ntBASIC0.62□□□□□ -2.31
VCANP13611 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
VCANP13611 RNU4-72P-201ENST00000410754 173 ntBASIC0.62□□□□□ -2.31
VCANP13611 AC096632.1-201ENST00000427395 310 ntBASIC0.62□□□□□ -2.31
VCANP13611 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.62□□□□□ -2.31
VCANP13611 GPM6BP3-201ENST00000442797 145 ntBASIC0.62□□□□□ -2.31
VCANP13611 snoU13.11-201ENST00000459219 104 ntBASIC0.62□□□□□ -2.31
VCANP13611 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.62□□□□□ -2.31
VCANP13611 AC108676.2-201ENST00000605225 163 ntBASIC0.62□□□□□ -2.31
VCANP13611 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
VCANP13611 SNX3P1X-201ENST00000414887 175 ntBASIC0.61□□□□□ -2.31
VCANP13611 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
VCANP13611 RNU4-67P-201ENST00000364569 141 ntBASIC0.61□□□□□ -2.31
VCANP13611 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
VCANP13611 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.61□□□□□ -2.31
VCANP13611 AL390240.1-201ENST00000612950 384 ntBASIC0.61□□□□□ -2.31
VCANP13611 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.61□□□□□ -2.31
VCANP13611 U8.14-201ENST00000390843 143 ntBASIC0.6□□□□□ -2.31
VCANP13611 AC096745.1-201ENST00000509945 370 ntBASIC0.6□□□□□ -2.31
VCANP13611 SNORA14.1-201ENST00000516113 141 ntBASIC0.6□□□□□ -2.31
VCANP13611 LINC00557-201ENST00000563184 1279 ntBASIC0.6□□□□□ -2.31
VCANP13611 AC136932.1-201ENST00000574771 208 ntBASIC0.6□□□□□ -2.31
VCANP13611 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
VCANP13611 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
VCANP13611 PTGES3P2-201ENST00000407942 482 ntBASIC0.6□□□□□ -2.31
VCANP13611 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.6□□□□□ -2.31
VCANP13611 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.6□□□□□ -2.31
VCANP13611 ZNF192P1-203ENST00000565888 810 ntBASIC0.6□□□□□ -2.31
VCANP13611 MIR4493-201ENST00000584016 73 ntBASIC0.6□□□□□ -2.31
VCANP13611 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.6□□□□□ -2.31
VCANP13611 SNORD56.5-201ENST00000364281 72 ntBASIC0.6□□□□□ -2.31
VCANP13611 Y_RNA.552-201ENST00000384665 112 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms