Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL670379.8-201ENST00000605353 252 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL670379.7-201ENST00000605823 252 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.35□□□□□ -1.87
PCNAP12004 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 CR392039.5-201ENST00000623201 510 ntBASIC3.35□□□□□ -1.87
PCNAP12004 FRG1KP-201ENST00000623592 341 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL160394.1-201ENST00000624765 724 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.35□□□□□ -1.87
PCNAP12004 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.35□□□□□ -1.87
PCNAP12004 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PCNAP12004 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
PCNAP12004 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
PCNAP12004 ELF2P3-201ENST00000445099 1506 ntBASIC3.34□□□□□ -1.87
PCNAP12004 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCNAP12004 SDAD1P2-201ENST00000441308 2028 ntBASIC3.34□□□□□ -1.87
PCNAP12004 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCNAP12004 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCNAP12004 AC073343.1-201ENST00000328239 651 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RNU6-288P-201ENST00000363690 104 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RNU6-960P-201ENST00000364056 120 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RPS4XP8-201ENST00000402039 771 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.34□□□□□ -1.87
PCNAP12004 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCNAP12004 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 MTND3P21-201ENST00000433774 331 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC073063.1-201ENST00000434352 607 ntBASIC3.34□□□□□ -1.87
PCNAP12004 UBE2V1P8-201ENST00000437166 265 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RPL7P54-201ENST00000438336 674 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.34□□□□□ -1.87
PCNAP12004 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.34□□□□□ -1.87
PCNAP12004 RPS29P15-201ENST00000458329 171 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RN7SL542P-201ENST00000467147 294 ntBASIC3.34□□□□□ -1.87
PCNAP12004 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC126389.1-201ENST00000477436 290 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC116562.3-201ENST00000506136 177 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC117522.1-201ENST00000509821 380 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.34□□□□□ -1.87
PCNAP12004 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.34□□□□□ -1.87
PCNAP12004 AC068587.5-201ENST00000528506 175 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.34□□□□□ -1.87
PCNAP12004 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.34□□□□□ -1.87
PCNAP12004 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.34□□□□□ -1.87
PCNAP12004 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.34□□□□□ -1.87
PCNAP12004 AL359212.1-201ENST00000556608 614 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.34□□□□□ -1.87
PCNAP12004 AC002545.1-201ENST00000592511 181 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC017083.3-201ENST00000609955 700 ntBASIC3.34□□□□□ -1.87
PCNAP12004 MIR7851-201ENST00000610611 160 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AL110115.1-201ENST00000614396 364 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AC090517.2-201ENST00000614966 680 ntBASIC3.34□□□□□ -1.87
PCNAP12004 AL034408.1-202ENST00000636088 415 ntBASIC3.34□□□□□ -1.87
PCNAP12004 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.34□□□□□ -1.87
PCNAP12004 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCNAP12004 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.34□□□□□ -1.88
PCNAP12004 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCNAP12004 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCNAP12004 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCNAP12004 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.33□□□□□ -1.88
PCNAP12004 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PCNAP12004 RNU6-1120P-201ENST00000362988 108 ntBASIC3.33□□□□□ -1.88
PCNAP12004 MIR181A1-201ENST00000385026 110 ntBASIC3.33□□□□□ -1.88
PCNAP12004 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCNAP12004 AL591034.1-201ENST00000407447 340 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL513331.1-201ENST00000411908 397 ntBASIC3.33□□□□□ -1.88
PCNAP12004 HSPE1P1-201ENST00000421494 318 ntBASIC3.33□□□□□ -1.88
PCNAP12004 ELOCP14-201ENST00000428070 331 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AC007919.1-201ENST00000429380 217 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AC018644.1-201ENST00000429934 551 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL606489.2-201ENST00000433886 234 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.33□□□□□ -1.88
PCNAP12004 ELOCP7-201ENST00000439968 331 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.33□□□□□ -1.88
PCNAP12004 RPL23AP20-201ENST00000447965 421 ntBASIC3.33□□□□□ -1.88
PCNAP12004 FDX1P2-201ENST00000450769 375 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.33□□□□□ -1.88
PCNAP12004 AC027673.1-201ENST00000456245 405 ntBASIC3.33□□□□□ -1.88
PCNAP12004 RNU6-420P-201ENST00000458780 107 ntBASIC3.33□□□□□ -1.88
PCNAP12004 MRPS17P3-201ENST00000465453 385 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL672167.3-201ENST00000465951 960 ntBASIC3.33□□□□□ -1.88
PCNAP12004 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
PCNAP12004 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.33□□□□□ -1.88
PCNAP12004 AC108078.2-201ENST00000510750 236 ntBASIC3.33□□□□□ -1.88
PCNAP12004 SNORD27.1-201ENST00000516319 72 ntBASIC3.33□□□□□ -1.88
PCNAP12004 RNA5SP471-201ENST00000516971 106 ntBASIC3.33□□□□□ -1.88
PCNAP12004 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.33□□□□□ -1.88
PCNAP12004 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.33□□□□□ -1.88
PCNAP12004 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.33□□□□□ -1.88
PCNAP12004 OR5AL2P-201ENST00000532185 920 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AL512360.1-201ENST00000555346 234 ntBASIC3.33□□□□□ -1.88
PCNAP12004 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.33□□□□□ -1.88
PCNAP12004 RPL23AP84-201ENST00000571193 464 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AC008752.3-201ENST00000588113 712 ntBASIC3.33□□□□□ -1.88
PCNAP12004 AC093227.2-201ENST00000589357 285 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms