Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
LAMP1P11279 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
LAMP1P11279 RNU6-1284P-201ENST00000363701 100 ntBASIC2.54□□□□□ -2
LAMP1P11279 SNORA40.3-201ENST00000390964 122 ntBASIC2.54□□□□□ -2
LAMP1P11279 RPS4XP3-201ENST00000398541 413 ntBASIC2.54□□□□□ -2
LAMP1P11279 SPA17P1-201ENST00000416656 452 ntBASIC2.54□□□□□ -2
LAMP1P11279 SEPT2P1-201ENST00000419651 180 ntBASIC2.54□□□□□ -2
LAMP1P11279 AL451054.2-201ENST00000420896 202 ntBASIC2.54□□□□□ -2
LAMP1P11279 AL645937.1-202ENST00000421799 937 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC019097.1-201ENST00000424783 735 ntBASIC2.54□□□□□ -2
LAMP1P11279 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.54□□□□□ -2
LAMP1P11279 AC092573.2-201ENST00000434546 243 ntBASIC2.54□□□□□ -2
LAMP1P11279 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.54□□□□□ -2
LAMP1P11279 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
LAMP1P11279 MTND6P13-201ENST00000443510 523 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.54□□□□□ -2
LAMP1P11279 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.54□□□□□ -2
LAMP1P11279 SSXP1-201ENST00000453640 473 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.54□□□□□ -2
LAMP1P11279 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.54□□□□□ -2
LAMP1P11279 SNORD42A-201ENST00000459584 64 ntBASIC2.54□□□□□ -2
LAMP1P11279 HMGN2P13-201ENST00000476476 274 ntBASIC2.54□□□□□ -2
LAMP1P11279 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.54□□□□□ -2
LAMP1P11279 RPS27AP9-201ENST00000477681 438 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.54□□□□□ -2
LAMP1P11279 AC117522.2-201ENST00000510049 657 ntBASIC2.54□□□□□ -2
LAMP1P11279 TTC39CP1-201ENST00000512513 755 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.54□□□□□ -2
LAMP1P11279 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
LAMP1P11279 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.54□□□□□ -2
LAMP1P11279 MTCO3P13-201ENST00000577757 781 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC073544.2-201ENST00000601155 540 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC131902.3-201ENST00000611767 581 ntBASIC2.54□□□□□ -2
LAMP1P11279 AC091304.9-201ENST00000612091 226 ntBASIC2.54□□□□□ -2
LAMP1P11279 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.54□□□□□ -2
LAMP1P11279 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LAMP1P11279 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
LAMP1P11279 AC092435.3-201ENST00000565538 3654 ntBASIC2.53□□□□□ -2
LAMP1P11279 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.53□□□□□ -2
LAMP1P11279 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LAMP1P11279 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.53□□□□□ -2
LAMP1P11279 RNU4-1-201ENST00000363925 141 ntBASIC2.53□□□□□ -2
LAMP1P11279 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
LAMP1P11279 SNORD21-201ENST00000383953 95 ntBASIC2.53□□□□□ -2
LAMP1P11279 SNORA1.3-201ENST00000384676 136 ntBASIC2.53□□□□□ -2
LAMP1P11279 RNU1-101P-201ENST00000391171 127 ntBASIC2.53□□□□□ -2
LAMP1P11279 MRPL42P2-201ENST00000403169 426 ntBASIC2.53□□□□□ -2
LAMP1P11279 AL513331.1-201ENST00000411908 397 ntBASIC2.53□□□□□ -2
LAMP1P11279 RPS3AP3-201ENST00000411933 242 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.53□□□□□ -2
LAMP1P11279 MRPL50P2-201ENST00000416821 482 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC006366.1-201ENST00000422002 759 ntBASIC2.53□□□□□ -2
LAMP1P11279 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC091390.3-201ENST00000426478 338 ntBASIC2.53□□□□□ -2
LAMP1P11279 AL589872.1-201ENST00000426602 288 ntBASIC2.53□□□□□ -2
LAMP1P11279 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.53□□□□□ -2
LAMP1P11279 RPL36AP6-201ENST00000435770 321 ntBASIC2.53□□□□□ -2
LAMP1P11279 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.53□□□□□ -2
LAMP1P11279 MTCO2P16-201ENST00000436962 677 ntBASIC2.53□□□□□ -2
LAMP1P11279 AL022238.1-201ENST00000442557 355 ntBASIC2.53□□□□□ -2
LAMP1P11279 MTATP6P30-201ENST00000443540 664 ntBASIC2.53□□□□□ -2
LAMP1P11279 AP000936.2-201ENST00000447151 681 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC020550.1-201ENST00000447385 163 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC093392.2-201ENST00000450682 337 ntBASIC2.53□□□□□ -2
LAMP1P11279 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.53□□□□□ -2
LAMP1P11279 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.53□□□□□ -2
LAMP1P11279 AL033528.1-201ENST00000453780 140 ntBASIC2.53□□□□□ -2
LAMP1P11279 AL590639.1-201ENST00000456484 337 ntBASIC2.53□□□□□ -2
LAMP1P11279 MTND1P3-201ENST00000484956 952 ntBASIC2.53□□□□□ -2
LAMP1P11279 Y_RNA.672-201ENST00000516289 104 ntBASIC2.53□□□□□ -2
LAMP1P11279 RNU2-46P-201ENST00000517038 113 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.53□□□□□ -2
LAMP1P11279 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.53□□□□□ -2
LAMP1P11279 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.53□□□□□ -2
LAMP1P11279 MIR4635-201ENST00000583759 79 ntBASIC2.53□□□□□ -2
LAMP1P11279 AP000860.1-201ENST00000605250 559 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC087752.4-201ENST00000605911 462 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC103710.2-201ENST00000609912 942 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC008250.2-201ENST00000615261 205 ntBASIC2.53□□□□□ -2
LAMP1P11279 MIR6076-201ENST00000617521 113 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC006338.1-201ENST00000618453 749 ntBASIC2.53□□□□□ -2
LAMP1P11279 AC027309.3-201ENST00000623419 351 ntBASIC2.53□□□□□ -2
LAMP1P11279 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
LAMP1P11279 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
LAMP1P11279 GNG5P1-201ENST00000255500 204 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 MIR208A-201ENST00000362287 71 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 RNU6-511P-201ENST00000363496 107 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 RNU6-297P-201ENST00000384636 107 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 MIR592-201ENST00000384959 97 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 RPS15AP12-201ENST00000419498 388 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 HSPE1P1-201ENST00000421494 318 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.52□□□□□ -2.01
LAMP1P11279 USP9YP36-201ENST00000424581 829 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.52□□□□□ -2.01
LAMP1P11279 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.52□□□□□ -2.01
LAMP1P11279 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 CBWD4P-201ENST00000445695 655 ntBASIC2.52□□□□□ -2.01
LAMP1P11279 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms