Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOAP06340 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOAP06340 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOAP06340 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOAP06340 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOAP06340 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOAP06340 CEP170P1-201ENST00000502249 4587 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 RNU6-278P-201ENST00000390945 109 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 SNORA75.4-201ENST00000391278 119 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 RNU4-14P-201ENST00000410858 122 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 CYP4F29P-201ENST00000420685 446 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 OR2AS1P-201ENST00000427827 319 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC005300.1-201ENST00000428401 373 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 CKS1BP5-201ENST00000434172 273 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOAP06340 ST13P14-201ENST00000474095 734 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC083904.1-201ENST00000487828 231 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC116562.3-201ENST00000506136 177 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 SNORA19.2-201ENST00000516013 114 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 RNU6-64P-201ENST00000517119 105 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC068587.5-201ENST00000528506 175 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 CR383656.7-201ENST00000548164 174 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AL442663.2-201ENST00000554385 511 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 AP001836.1-201ENST00000604675 523 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC113139.1-201ENST00000605049 239 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 AC103710.3-201ENST00000608157 948 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOAP06340 MIR3651-201ENST00000630427 90 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 MIR6715B-201ENST00000637172 77 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 MAPK10-253ENST00000641010 4072 ntBASIC4.09□□□□□ -1.75
HLA-DOAP06340 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.09□□□□□ -1.76
HLA-DOAP06340 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
HLA-DOAP06340 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 HSPE1P11-201ENST00000339579 310 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 SNORA38.1-201ENST00000364172 131 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 Y_RNA.579-201ENST00000390939 94 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 RNU2-62P-201ENST00000410868 191 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AL451054.2-201ENST00000420896 202 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 MED13P1-201ENST00000428342 171 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 PRPS1P1-201ENST00000445305 876 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 RPS29P31-201ENST00000446147 164 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AL590399.6-201ENST00000446396 307 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 MTND4P19-201ENST00000446659 478 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC020550.1-201ENST00000447385 163 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 NIPA2P5-201ENST00000452282 464 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC108059.3-201ENST00000456388 214 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC084357.1-201ENST00000473404 255 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC135721.1-201ENST00000497954 479 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 CCDC34P1-201ENST00000507441 517 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 RNU6-273P-201ENST00000516937 96 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC109635.4-202ENST00000531666 412 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 BNIP3P6-201ENST00000549284 499 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC093249.1-201ENST00000567049 203 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AC024619.4-201ENST00000580924 316 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 MIR4293-201ENST00000584305 78 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 DUSP12P1-201ENST00000612874 516 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 AL158196.1-201ENST00000616786 434 ntBASIC4.08□□□□□ -1.76
HLA-DOAP06340 MTND4LP32-201ENST00000636111 270 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms