Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC104090.1-201ENST00000506341 1171 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC093281.2-201ENST00000510153 597 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC026436.1-201ENST00000510537 270 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 BTF3P12-201ENST00000519620 469 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC022634.1-201ENST00000520765 532 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 MTND2P7-201ENST00000521337 640 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 UBTFL10-201ENST00000528532 562 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC022662.1-201ENST00000580252 331 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC112220.3-201ENST00000605502 502 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC135507.1-201ENST00000607214 561 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC008498.1-201ENST00000613012 531 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 MIR6817-201ENST00000615588 66 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC009090.3-201ENST00000616553 565 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.99□□□□□ -2.09
MT-ND4P03905 MIR1291-201ENST00000627649 87 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 PCMTD1P7-201ENST00000634506 357 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND4P03905 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MT-ND4P03905 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MT-ND4P03905 RNU6-223P-201ENST00000362830 107 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AL355497.1-201ENST00000406262 551 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 RNU6-920P-201ENST00000410926 92 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AC083875.1-201ENST00000419509 405 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 SEPT2P1-201ENST00000419651 180 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AL354692.1-201ENST00000423044 315 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AL445669.1-201ENST00000426743 755 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.98□□□□□ -2.09
MT-ND4P03905 AC010153.1-201ENST00000432862 727 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.98□□□□□ -2.09
MT-ND4P03905 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 AC008481.1-201ENST00000463278 396 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 MTCYBP43-201ENST00000513621 740 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 RNA5SP148-201ENST00000516527 94 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.98□□□□□ -2.09
MT-ND4P03905 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.98□□□□□ -2.09
MT-ND4P03905 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND4P03905 AC021171.1-201ENST00000603137 706 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AC025594.3-201ENST00000613068 790 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AL136981.2-201ENST00000617319 734 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 AC112204.3-201ENST00000623822 332 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
MT-ND4P03905 MTND5P33-201ENST00000571250 1450 ntBASIC1.98□□□□□ -2.09
MT-ND4P03905 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
MT-ND4P03905 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
MT-ND4P03905 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.98□□□□□ -2.09
MT-ND4P03905 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
MT-ND4P03905 ZNF29P-201ENST00000225587 168 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MT-ND4P03905 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MT-ND4P03905 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MT-ND4P03905 RNU6-462P-201ENST00000362659 105 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.97□□□□□ -2.09
MT-ND4P03905 RNU6-301P-201ENST00000384277 107 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 RNU6-636P-201ENST00000384598 107 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 MIR888-201ENST00000401186 77 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 RN7SKP266-201ENST00000410232 287 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 RNU2-49P-201ENST00000410666 184 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 PIGPP2-201ENST00000411569 458 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 HMGB3P2-201ENST00000411913 584 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
MT-ND4P03905 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND4P03905 RPS15AP5-201ENST00000436276 388 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 MTND3P1-201ENST00000441336 220 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 IPO7P1-201ENST00000442031 636 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.97□□□□□ -2.09
MT-ND4P03905 ANKRD26P4-201ENST00000455755 950 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 RPS3P1-201ENST00000456781 192 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 RPL26P9-201ENST00000457466 433 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.97□□□□□ -2.09
MT-ND4P03905 AC010631.1-201ENST00000474150 156 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AL160314.1-201ENST00000490836 438 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AC034222.1-201ENST00000494052 532 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND4P03905 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms