Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPL23AP29-201ENST00000397284 453 ntBASIC1.89□□□□□ -2.11
APOEP02649 HMGB1P49-201ENST00000418882 569 ntBASIC1.89□□□□□ -2.11
APOEP02649 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.89□□□□□ -2.11
APOEP02649 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
APOEP02649 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
APOEP02649 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.89□□□□□ -2.11
APOEP02649 TOMM20P4-201ENST00000427861 435 ntBASIC1.89□□□□□ -2.11
APOEP02649 AL512661.1-201ENST00000434586 1253 ntBASIC1.89□□□□□ -2.11
APOEP02649 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.89□□□□□ -2.11
APOEP02649 AC104564.1-201ENST00000493028 407 ntBASIC1.89□□□□□ -2.11
APOEP02649 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
APOEP02649 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.89□□□□□ -2.11
APOEP02649 AC010460.2-201ENST00000509054 677 ntBASIC1.89□□□□□ -2.11
APOEP02649 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
APOEP02649 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
APOEP02649 EEF1A1P37-201ENST00000522748 715 ntBASIC1.89□□□□□ -2.11
APOEP02649 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.89□□□□□ -2.11
APOEP02649 AC104984.5-201ENST00000586878 94 ntBASIC1.89□□□□□ -2.11
APOEP02649 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.89□□□□□ -2.11
APOEP02649 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.89□□□□□ -2.11
APOEP02649 OR4H6P-202ENST00000603819 340 ntBASIC1.89□□□□□ -2.11
APOEP02649 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.89□□□□□ -2.11
APOEP02649 FTX_3.1-201ENST00000610451 147 ntBASIC1.89□□□□□ -2.11
APOEP02649 MIR6715A-201ENST00000615929 79 ntBASIC1.89□□□□□ -2.11
APOEP02649 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.89□□□□□ -2.11
APOEP02649 AC011477.1-204ENST00000623416 1325 ntBASIC1.89□□□□□ -2.11
APOEP02649 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOEP02649 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
APOEP02649 RNU6-792P-201ENST00000363490 107 ntBASIC1.88□□□□□ -2.11
APOEP02649 RNU6-650P-201ENST00000365658 111 ntBASIC1.88□□□□□ -2.11
APOEP02649 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOEP02649 RNU6-1083P-201ENST00000384022 107 ntBASIC1.88□□□□□ -2.11
APOEP02649 Y_RNA.548-201ENST00000384656 105 ntBASIC1.88□□□□□ -2.11
APOEP02649 RNU6-932P-201ENST00000391108 106 ntBASIC1.88□□□□□ -2.11
APOEP02649 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.88□□□□□ -2.11
APOEP02649 RPL7P55-201ENST00000450522 746 ntBASIC1.88□□□□□ -2.11
APOEP02649 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
APOEP02649 AC010468.3-201ENST00000508225 458 ntBASIC1.88□□□□□ -2.11
APOEP02649 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.88□□□□□ -2.11
APOEP02649 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.88□□□□□ -2.11
APOEP02649 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.88□□□□□ -2.11
APOEP02649 AK6P1-201ENST00000540219 478 ntBASIC1.88□□□□□ -2.11
APOEP02649 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.88□□□□□ -2.11
APOEP02649 ZNF92P2-201ENST00000600543 1059 ntBASIC1.88□□□□□ -2.11
APOEP02649 AL603758.1-201ENST00000618654 241 ntBASIC1.88□□□□□ -2.11
APOEP02649 AC025048.6-202ENST00000627667 438 ntBASIC1.88□□□□□ -2.11
APOEP02649 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.88□□□□□ -2.11
APOEP02649 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
APOEP02649 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
APOEP02649 RNU6-1066P-201ENST00000363573 105 ntBASIC1.87□□□□□ -2.11
APOEP02649 RNU1-148P-201ENST00000384472 162 ntBASIC1.87□□□□□ -2.11
APOEP02649 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
APOEP02649 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
APOEP02649 FAM204CP-201ENST00000424489 642 ntBASIC1.87□□□□□ -2.11
APOEP02649 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 MTCYBP32-201ENST00000427945 1084 ntBASIC1.87□□□□□ -2.11
APOEP02649 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 AC006499.2-201ENST00000513470 337 ntBASIC1.87□□□□□ -2.11
APOEP02649 SCARNA3-201ENST00000517097 143 ntBASIC1.87□□□□□ -2.11
APOEP02649 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
APOEP02649 HSPA8P13-201ENST00000523715 472 ntBASIC1.87□□□□□ -2.11
APOEP02649 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.87□□□□□ -2.11
APOEP02649 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
APOEP02649 CBX3P7-201ENST00000532876 502 ntBASIC1.87□□□□□ -2.11
APOEP02649 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.87□□□□□ -2.11
APOEP02649 ZNF971P-201ENST00000562068 1249 ntBASIC1.87□□□□□ -2.11
APOEP02649 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.87□□□□□ -2.11
APOEP02649 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.87□□□□□ -2.11
APOEP02649 AC025811.1-201ENST00000604312 472 ntBASIC1.87□□□□□ -2.11
APOEP02649 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
APOEP02649 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
APOEP02649 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.87□□□□□ -2.11
APOEP02649 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.87□□□□□ -2.11
APOEP02649 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
APOEP02649 AC010889.1-201ENST00000566193 2666 ntBASIC1.86□□□□□ -2.11
APOEP02649 RNU5E-8P-201ENST00000363502 116 ntBASIC1.86□□□□□ -2.11
APOEP02649 RNU6-234P-201ENST00000365229 104 ntBASIC1.86□□□□□ -2.11
APOEP02649 U8.14-201ENST00000390843 143 ntBASIC1.86□□□□□ -2.11
APOEP02649 SNRPEP2-201ENST00000397592 279 ntBASIC1.86□□□□□ -2.11
APOEP02649 RNA5SP270-201ENST00000411361 118 ntBASIC1.86□□□□□ -2.11
APOEP02649 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.86□□□□□ -2.11
APOEP02649 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.86□□□□□ -2.11
APOEP02649 AC093106.2-201ENST00000428212 385 ntBASIC1.86□□□□□ -2.11
APOEP02649 MED14P1-201ENST00000430517 648 ntBASIC1.86□□□□□ -2.11
APOEP02649 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.86□□□□□ -2.11
APOEP02649 AC004383.1-201ENST00000438135 289 ntBASIC1.86□□□□□ -2.11
APOEP02649 RPL7P54-201ENST00000438336 674 ntBASIC1.86□□□□□ -2.11
APOEP02649 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.86□□□□□ -2.11
APOEP02649 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.86□□□□□ -2.11
APOEP02649 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.86□□□□□ -2.11
APOEP02649 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.86□□□□□ -2.11
APOEP02649 BOLA3P3-201ENST00000505182 232 ntBASIC1.86□□□□□ -2.11
APOEP02649 RNU6-528P-201ENST00000516926 100 ntBASIC1.86□□□□□ -2.11
APOEP02649 SNORA31.25-201ENST00000517242 134 ntBASIC1.86□□□□□ -2.11
APOEP02649 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.86□□□□□ -2.11
APOEP02649 MIR4789-201ENST00000577469 82 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms