Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MTND2P14-201ENST00000482139 351 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC083906.5-201ENST00000503722 328 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MRPS36P2-201ENST00000512569 299 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC116347.2-201ENST00000514912 523 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RNA5SP471-201ENST00000516971 106 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RN7SKP40-201ENST00000517211 242 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 DEFB108A-201ENST00000530110 222 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC123904.2-201ENST00000548059 300 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC074050.1-201ENST00000563247 211 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 ISCA1P3-201ENST00000577104 373 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MIR4325-201ENST00000583049 90 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL136363.1-201ENST00000605349 337 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC239868.4-201ENST00000608318 671 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC108747.1-201ENST00000609508 535 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AP000240.1-201ENST00000609910 452 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RNU6-1167P-201ENST00000363227 94 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 Y_RNA.245-201ENST00000364493 95 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 MIR767-201ENST00000390228 109 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 U8.14-201ENST00000390843 143 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 SNORA11.1-201ENST00000408133 129 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RNU6-193P-201ENST00000410977 107 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 EEF1A1P41-201ENST00000414667 207 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 XKRYP1-201ENST00000423438 492 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL593851.1-201ENST00000426171 157 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 XKRYP2-201ENST00000432915 492 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC112220.1-201ENST00000434628 355 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 MTND1P28-201ENST00000435623 950 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 TIMM9P1-201ENST00000436122 256 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 SNRPEP9-201ENST00000436794 238 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL591719.1-201ENST00000444669 744 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RPS15AP27-201ENST00000449183 343 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC087588.1-201ENST00000462203 316 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RPL36AP51-201ENST00000487216 318 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RPF2P2-201ENST00000504693 896 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC114786.4-201ENST00000508771 728 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 SNORA74D-201ENST00000516404 141 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 RN7SKP258-201ENST00000517151 304 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 GLYCAM1-201ENST00000546596 285 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AL356432.3-201ENST00000568952 465 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 MYL12BP1-201ENST00000569826 507 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AP001004.1-201ENST00000582468 324 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 MIR4760-201ENST00000585040 80 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 BNIP3P22-201ENST00000593399 556 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AC008751.2-201ENST00000597885 980 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 AP000403.1-201ENST00000603349 851 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 CR848007.1-201ENST00000442354 1699 ntBASIC1.93□□□□□ -2.1
HLA-DQA1P01909 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQA1P01909 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC135776.4-201ENST00000624300 1904 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 RNU6-512P-201ENST00000364438 103 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 SNORA48.5-201ENST00000391143 135 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms