Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 LARP1BP2-201ENST00000486594 519 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC106872.3-201ENST00000495104 446 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 RPL38P4-201ENST00000502376 214 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 CDC42P4-201ENST00000510507 563 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 RNA5SP471-201ENST00000516971 106 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.78□□□□□ -2.12
CPSF4O95639 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 AC124947.2-202ENST00000552735 133 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 AC005951.2-201ENST00000576282 495 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 APOOP1-201ENST00000604695 592 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 AL590808.1-201ENST00000618696 141 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC068880.5-201ENST00000624331 290 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 AC064859.1-201ENST00000624741 174 ntBASIC1.78□□□□□ -2.12
CPSF4O95639 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.78□□□□□ -2.12
CPSF4O95639 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CPSF4O95639 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.78□□□□□ -2.12
CPSF4O95639 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
CPSF4O95639 SDAD1P2-201ENST00000441308 2028 ntBASIC1.78□□□□□ -2.13
CPSF4O95639 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CPSF4O95639 ZNF29P-201ENST00000225587 168 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CPSF4O95639 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 RNU4-92P-201ENST00000363783 136 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 RNU1-39P-201ENST00000383897 165 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 SNORA3.2-201ENST00000408221 125 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 TPMTP3-201ENST00000411928 735 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 HMGN2P38-201ENST00000423806 265 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 RPL7L1P10-201ENST00000427790 463 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.77□□□□□ -2.13
CPSF4O95639 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.77□□□□□ -2.13
CPSF4O95639 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 COX7BP2-201ENST00000437976 242 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.77□□□□□ -2.13
CPSF4O95639 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.77□□□□□ -2.13
CPSF4O95639 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC011753.1-201ENST00000451001 220 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.77□□□□□ -2.13
CPSF4O95639 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC090515.1-201ENST00000465295 476 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC024589.1-201ENST00000512207 263 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC008549.1-201ENST00000512900 643 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.77□□□□□ -2.13
CPSF4O95639 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CPSF4O95639 AC009712.1-201ENST00000564938 316 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC068135.2-201ENST00000569293 1028 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 MIR3908-201ENST00000579798 126 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.77□□□□□ -2.13
CPSF4O95639 AL356280.1-201ENST00000603614 379 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC090186.1-201ENST00000605991 572 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC080013.3-201ENST00000606839 578 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.77□□□□□ -2.13
CPSF4O95639 AL139022.2-201ENST00000606934 443 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AL161629.2-201ENST00000615347 275 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AL136981.2-201ENST00000617319 734 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AL159972.1-201ENST00000625150 448 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 AC007785.2-201ENST00000598627 1916 ntBASIC1.77□□□□□ -2.13
CPSF4O95639 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
CPSF4O95639 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CPSF4O95639 AC104454.1-201ENST00000421341 1401 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AL049641.1-201ENST00000441055 1948 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF4O95639 SNORA23-201ENST00000365128 182 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 RNU6-1035P-201ENST00000384477 107 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 Z85995.1-201ENST00000415547 335 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4O95639 MTCO2P23-201ENST00000425216 680 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4O95639 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4O95639 MTCO2P20-201ENST00000437339 673 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 SNRPEP7-201ENST00000438350 220 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms