Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.26□□□□□ -2.21
SNRNP200O75643 TPTE2P4-201ENST00000258589 1605 ntBASIC1.26□□□□□ -2.21
SNRNP200O75643 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.26□□□□□ -2.21
SNRNP200O75643 RNU6-234P-201ENST00000365229 104 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 SNORA51.6-201ENST00000384151 125 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AC007098.1-201ENST00000420122 367 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 VN1R108P-201ENST00000431580 830 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.25□□□□□ -2.21
SNRNP200O75643 MTND5P8-201ENST00000449817 1083 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 HMGN2P18-201ENST00000450680 270 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 HMGN3P1-201ENST00000453847 193 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SNRNP200O75643 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AL359273.1-201ENST00000510918 627 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.25□□□□□ -2.21
SNRNP200O75643 HIGD1AP6-201ENST00000521833 279 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AC021749.1-201ENST00000604322 607 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AL359821.1-201ENST00000605519 182 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AP000238.1-201ENST00000608759 426 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC004908.2-201ENST00000609090 574 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC016911.1-201ENST00000613297 452 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SNRNP200O75643 STMN1P1-201ENST00000617809 440 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC098657.3-201ENST00000620434 263 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AC109454.4-201ENST00000623411 649 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 ZNF849P-201ENST00000594711 1566 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 CISD1P1-201ENST00000393907 327 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 SSXP10-201ENST00000402595 565 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 FCF1P2-201ENST00000415284 583 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AIMP1P2-201ENST00000425294 312 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SNRNP200O75643 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AL353691.1-201ENST00000451332 387 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 BOLA3P3-201ENST00000505182 232 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC108729.3-201ENST00000513484 108 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SNRNP200O75643 Y_RNA.676-201ENST00000516393 96 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 RNU6-885P-201ENST00000516607 104 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 RNU6-798P-201ENST00000516912 103 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AP005435.4-201ENST00000529514 284 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC139103.1-201ENST00000534696 1030 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 SETP7-201ENST00000552169 453 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 HMGB1P14-201ENST00000557424 591 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.25□□□□□ -2.21
SNRNP200O75643 AC095057.3-201ENST00000567102 1157 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AL669831.4-202ENST00000590817 238 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 GAS5-AS1-201ENST00000602767 694 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AL020997.3-201ENST00000602843 359 ntBASIC1.25□□□□□ -2.21
SNRNP200O75643 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.25□□□□□ -2.21
SNRNP200O75643 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNRNP200O75643 CDC27P3-201ENST00000635418 1910 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNRNP200O75643 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.24□□□□□ -2.21
SNRNP200O75643 AC009414.1-201ENST00000427200 443 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.24□□□□□ -2.21
SNRNP200O75643 ANKRD26P4-201ENST00000455755 950 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 RPL32P14-201ENST00000463196 378 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.24□□□□□ -2.21
SNRNP200O75643 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.24□□□□□ -2.21
SNRNP200O75643 COL6A4P2-205ENST00000509855 506 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AC087441.2-201ENST00000529141 262 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 NIFKP8-201ENST00000560500 874 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 OR1M4P-201ENST00000589199 287 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 SEPT7P9-203ENST00000604116 343 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.24□□□□□ -2.21
SNRNP200O75643 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.24□□□□□ -2.21
SNRNP200O75643 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNRNP200O75643 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNRNP200O75643 RNU6-251P-201ENST00000363235 104 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 RNU6-707P-201ENST00000364647 95 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 MIR525-201ENST00000384978 85 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.24□□□□□ -2.21
SNRNP200O75643 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.24□□□□□ -2.21
SNRNP200O75643 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.24□□□□□ -2.21
SNRNP200O75643 Z82190.1-201ENST00000454534 490 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.24□□□□□ -2.21
SNRNP200O75643 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.24□□□□□ -2.21
SNRNP200O75643 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.24□□□□□ -2.21
SNRNP200O75643 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SNRNP200O75643 BNIP3P8-201ENST00000597863 560 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 BNIP3P4-201ENST00000604946 565 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AC135507.1-201ENST00000607214 561 ntBASIC1.24□□□□□ -2.21
SNRNP200O75643 AC080128.1-201ENST00000474389 1917 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms