Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-566P-201ENST00000516790 107 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AC090281.1-201ENST00000523019 276 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 ELOCP31-201ENST00000540463 467 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VAMP4O75379 AL080274.1-201ENST00000605565 220 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AL355802.3-201ENST00000607571 545 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.77□□□□□ -1.65
VAMP4O75379 AC084781.2-201ENST00000615568 161 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.77□□□□□ -1.65
VAMP4O75379 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VAMP4O75379 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.77□□□□□ -1.65
VAMP4O75379 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VAMP4O75379 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.77□□□□□ -1.65
VAMP4O75379 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAMP4O75379 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VAMP4O75379 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAMP4O75379 MFSD8-236ENST00000641509 4050 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAMP4O75379 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAMP4O75379 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAMP4O75379 RNA5SP167-201ENST00000365461 116 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 RNU6-550P-201ENST00000391057 101 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AL590704.1-201ENST00000402856 794 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 POLHP1-201ENST00000411806 470 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 RPL30P2-201ENST00000414021 291 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.76□□□□□ -1.65
VAMP4O75379 MRPS18BP2-201ENST00000434310 759 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AF228730.2-201ENST00000438784 848 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 MTCO3P45-201ENST00000443036 613 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.76□□□□□ -1.65
VAMP4O75379 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.76□□□□□ -1.65
VAMP4O75379 RPL21P103-201ENST00000479921 488 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AC005741.1-201ENST00000511094 432 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.76□□□□□ -1.65
VAMP4O75379 RNU6-685P-201ENST00000517088 95 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AC023632.4-201ENST00000517783 191 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.76□□□□□ -1.65
VAMP4O75379 AL163153.1-201ENST00000554223 283 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 MIR5583-1-201ENST00000580941 59 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AC008521.1-201ENST00000587471 187 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.76□□□□□ -1.65
VAMP4O75379 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.76□□□□□ -1.65
VAMP4O75379 CYP2C61P-201ENST00000604072 290 ntBASIC4.76□□□□□ -1.65
VAMP4O75379 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.76□□□□□ -1.65
VAMP4O75379 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAMP4O75379 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.75□□□□□ -1.65
VAMP4O75379 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 Y_RNA.202-201ENST00000364083 110 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 SNORA63C-201ENST00000364578 129 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 Y_RNA.395-201ENST00000383945 109 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RNY4P36-201ENST00000391116 96 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 EIF4E2P1-201ENST00000393781 255 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 UBE2V1P2-201ENST00000397758 440 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RN7SKP158-201ENST00000410453 326 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RNU4-14P-201ENST00000410858 122 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RPL7P10-201ENST00000417407 739 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.75□□□□□ -1.65
VAMP4O75379 RPL21P112-201ENST00000434403 463 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.75□□□□□ -1.65
VAMP4O75379 HMGB3P11-201ENST00000440127 604 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 GAPDHP27-201ENST00000447427 1020 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 SCARNA18-201ENST00000459004 134 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC008481.1-201ENST00000463278 396 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC004801.2-202ENST00000463559 283 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RPL21P8-201ENST00000465083 535 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC090096.1-201ENST00000489168 390 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VAMP4O75379 RPL23AP55-201ENST00000498163 452 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.75□□□□□ -1.65
VAMP4O75379 RNU1-95P-201ENST00000516357 160 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RNU1-128P-201ENST00000516704 160 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 RNU1-45P-201ENST00000517191 141 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC174048.1-201ENST00000603389 144 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 DPPA3P3-201ENST00000603842 430 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC080078.3-201ENST00000605407 463 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AL627309.6-201ENST00000606857 840 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC103705.1-201ENST00000619013 241 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC110801.1-201ENST00000623590 212 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 MTND4LP32-201ENST00000636111 270 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 AC119674.1-207ENST00000641355 633 ntBASIC4.75□□□□□ -1.65
VAMP4O75379 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.75□□□□□ -1.65
VAMP4O75379 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.74□□□□□ -1.65
VAMP4O75379 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
VAMP4O75379 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VAMP4O75379 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VAMP4O75379 ZNF285B-201ENST00000561698 1767 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VAMP4O75379 MIR369-201ENST00000362155 70 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 RNU6-254P-201ENST00000363377 107 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 SMIM11P1-201ENST00000369586 178 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 RNU6-946P-201ENST00000383878 107 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 MIR153-1-201ENST00000384914 90 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 SNORA75.4-201ENST00000391278 119 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 MTCYBP4-201ENST00000401524 249 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms