Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 OR4G1P-203ENST00000641984 1631 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 RNU5B-4P-201ENST00000363508 111 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 RNU4-13P-201ENST00000364019 141 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 RNU2-72P-201ENST00000411175 163 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 HMGN2P30-201ENST00000423237 256 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 HMGN2P38-201ENST00000423806 265 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP4O75161 PNPLA4P1-201ENST00000458328 305 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.32□□□□□ -2.04
NPHP4O75161 AC093801.2-201ENST00000503966 1050 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP4O75161 AC009901.1-201ENST00000506703 541 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AC008526.1-201ENST00000509149 338 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.32□□□□□ -2.04
NPHP4O75161 MTCO3P27-201ENST00000514397 196 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AP003355.1-201ENST00000518956 587 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP4O75161 AP003168.1-201ENST00000530091 307 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.32□□□□□ -2.04
NPHP4O75161 AC015688.2-201ENST00000584523 262 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AL158211.2-201ENST00000607282 395 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AC097504.2-201ENST00000608088 454 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AP002826.1-201ENST00000608835 315 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AL157834.3-201ENST00000615543 103 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 PVT1_3.1-201ENST00000620853 95 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AC027309.3-201ENST00000623419 351 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
NPHP4O75161 AC006026.1-201ENST00000444025 1803 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 AC009812.4-201ENST00000569134 1805 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
NPHP4O75161 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPHP4O75161 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.31□□□□□ -2.04
NPHP4O75161 AC007742.1-201ENST00000425789 329 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 C1DP1-201ENST00000426049 402 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 EZH2P1-201ENST00000431167 291 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 ELOCP26-201ENST00000436067 329 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 THAP5P1-201ENST00000439089 262 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 USP9YP10-201ENST00000454868 628 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP4O75161 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP4O75161 AC025755.1-201ENST00000521306 278 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 HMGN1P28-201ENST00000521340 364 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 MTCO3P15-201ENST00000526563 574 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.31□□□□□ -2.04
NPHP4O75161 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.31□□□□□ -2.04
NPHP4O75161 AC015720.1-201ENST00000565251 277 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 AC245036.5-201ENST00000596330 847 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 AC136443.5-201ENST00000603741 370 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 AC093875.1-201ENST00000623688 504 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.31□□□□□ -2.04
NPHP4O75161 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.31□□□□□ -2.04
NPHP4O75161 AC087821.2-201ENST00000637086 450 ntBASIC2.31□□□□□ -2.04
NPHP4O75161 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
NPHP4O75161 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NPHP4O75161 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPHP4O75161 SNORD56.5-201ENST00000364281 72 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 SNORD65.1-201ENST00000390889 71 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.3□□□□□ -2.04
NPHP4O75161 AC017099.1-201ENST00000448261 1028 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AL353691.1-201ENST00000451332 387 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 SEM1P1-201ENST00000506694 209 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC113420.1-201ENST00000507903 571 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NPHP4O75161 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.3□□□□□ -2.04
NPHP4O75161 BNIP3P24-201ENST00000593398 557 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AL592148.2-201ENST00000612210 372 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC005296.1-201ENST00000616145 209 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC006213.4-201ENST00000616184 634 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC084824.4-201ENST00000620106 731 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC004009.2-201ENST00000623016 728 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 AC090772.4-201ENST00000623599 362 ntBASIC2.3□□□□□ -2.04
NPHP4O75161 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPHP4O75161 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
NPHP4O75161 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NPHP4O75161 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NPHP4O75161 RNU6-1197P-201ENST00000391183 107 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 ANAPC10P1-201ENST00000395991 556 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.29□□□□□ -2.04
NPHP4O75161 AL590233.1-201ENST00000430017 456 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 MTCYBP45-201ENST00000435243 565 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 PIGFP3-201ENST00000441918 722 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 RPL39P6-201ENST00000448289 150 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
NPHP4O75161 AC104164.3-201ENST00000467363 1258 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.29□□□□□ -2.04
NPHP4O75161 RNU1-40P-201ENST00000516816 164 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 RNU1-97P-201ENST00000516872 164 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 RNU6-798P-201ENST00000516912 103 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPHP4O75161 AP001189.2-201ENST00000527320 189 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 AC011604.1-201ENST00000545978 196 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 AL136520.1-202ENST00000555494 763 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.29□□□□□ -2.04
NPHP4O75161 AC104581.2-201ENST00000572227 430 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 MIR4419B-201ENST00000577260 68 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 MIR5708-201ENST00000579723 85 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.29□□□□□ -2.04
NPHP4O75161 AP000254.1-201ENST00000609934 520 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms