Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LDB3O75112 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LDB3O75112 EXOC5P1-201ENST00000510543 1969 ntBASIC3.27□□□□□ -1.89
LDB3O75112 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB3O75112 AL672296.1-201ENST00000427780 2158 ntBASIC3.27□□□□□ -1.89
LDB3O75112 Y_RNA.22-201ENST00000362492 102 ntBASIC3.27□□□□□ -1.89
LDB3O75112 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
LDB3O75112 Y_RNA.72-201ENST00000362894 103 ntBASIC3.27□□□□□ -1.89
LDB3O75112 Y_RNA.132-201ENST00000363421 102 ntBASIC3.27□□□□□ -1.89
LDB3O75112 RNU6-108P-201ENST00000365558 107 ntBASIC3.27□□□□□ -1.89
LDB3O75112 SNORA48.7-201ENST00000391302 135 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AL109755.1-201ENST00000401791 649 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AL122016.1-201ENST00000403365 367 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AL162578.1-201ENST00000406202 378 ntBASIC3.27□□□□□ -1.89
LDB3O75112 FAT1P1-201ENST00000406588 507 ntBASIC3.27□□□□□ -1.89
LDB3O75112 RNA5SP129-201ENST00000410276 118 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC068533.1-201ENST00000418542 415 ntBASIC3.27□□□□□ -1.89
LDB3O75112 BX842559.1-201ENST00000419615 532 ntBASIC3.27□□□□□ -1.89
LDB3O75112 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AL049714.1-201ENST00000466686 347 ntBASIC3.27□□□□□ -1.89
LDB3O75112 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC026784.1-201ENST00000507986 352 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB3O75112 RNU6-277P-201ENST00000516272 106 ntBASIC3.27□□□□□ -1.89
LDB3O75112 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB3O75112 AP003072.2-201ENST00000527756 676 ntBASIC3.27□□□□□ -1.89
LDB3O75112 SNRPGP16-201ENST00000533275 226 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB3O75112 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 SCOCP1-201ENST00000554676 349 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.27□□□□□ -1.89
LDB3O75112 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LDB3O75112 FAM60BP-201ENST00000578364 658 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB3O75112 AC005498.1-201ENST00000592125 465 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC022432.1-201ENST00000595739 310 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.27□□□□□ -1.89
LDB3O75112 AC021646.1-201ENST00000605469 484 ntBASIC3.27□□□□□ -1.89
LDB3O75112 U3.45-201ENST00000607547 219 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 AL355810.1-201ENST00000614629 552 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AL354950.2-201ENST00000617939 290 ntBASIC3.27□□□□□ -1.89
LDB3O75112 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
LDB3O75112 FRG1KP-201ENST00000623592 341 ntBASIC3.27□□□□□ -1.89
LDB3O75112 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 MIR4275-201ENST00000636486 87 ntBASIC3.27□□□□□ -1.89
LDB3O75112 HSPA8P1-201ENST00000425843 1833 ntBASIC3.27□□□□□ -1.89
LDB3O75112 RIOK3P1-201ENST00000418778 1528 ntBASIC3.27□□□□□ -1.89
LDB3O75112 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB3O75112 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB3O75112 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB3O75112 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB3O75112 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB3O75112 AC006020.1-201ENST00000420179 1854 ntBASIC3.26□□□□□ -1.89
LDB3O75112 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB3O75112 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LDB3O75112 AL161912.2-201ENST00000565707 3007 ntBASIC3.26□□□□□ -1.89
LDB3O75112 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.26□□□□□ -1.89
LDB3O75112 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB3O75112 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB3O75112 RNU6-50P-201ENST00000362356 103 ntBASIC3.26□□□□□ -1.89
LDB3O75112 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.26□□□□□ -1.89
LDB3O75112 U3.11-201ENST00000364476 212 ntBASIC3.26□□□□□ -1.89
LDB3O75112 DEFB109C-201ENST00000382575 264 ntBASIC3.26□□□□□ -1.89
LDB3O75112 DEFB109B-201ENST00000382656 264 ntBASIC3.26□□□□□ -1.89
LDB3O75112 MIR670-201ENST00000390142 98 ntBASIC3.26□□□□□ -1.89
LDB3O75112 RNU6-882P-201ENST00000391025 103 ntBASIC3.26□□□□□ -1.89
LDB3O75112 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB3O75112 RPS20P15-201ENST00000412792 311 ntBASIC3.26□□□□□ -1.89
LDB3O75112 SSXP9-201ENST00000417503 292 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 MTCYBP8-201ENST00000422855 651 ntBASIC3.26□□□□□ -1.89
LDB3O75112 MTCO1P39-201ENST00000426148 480 ntBASIC3.26□□□□□ -1.89
LDB3O75112 GPR143P-201ENST00000434155 205 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC004866.2-201ENST00000438285 481 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB3O75112 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 RPS15AP36-201ENST00000492022 382 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC068305.1-201ENST00000497406 726 ntBASIC3.26□□□□□ -1.89
LDB3O75112 EIF4EP3-201ENST00000498782 656 ntBASIC3.26□□□□□ -1.89
LDB3O75112 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 AC110768.1-201ENST00000509222 400 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 AC105029.1-201ENST00000520250 669 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 AC243972.3-201ENST00000539655 198 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms