Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RIPK2O43353 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.54□□□□□ -2
RIPK2O43353 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
RIPK2O43353 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RIPK2O43353 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.54□□□□□ -2
RIPK2O43353 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
RIPK2O43353 RNU6-778P-201ENST00000363269 103 ntBASIC2.54□□□□□ -2
RIPK2O43353 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
RIPK2O43353 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RIPK2O43353 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.54□□□□□ -2
RIPK2O43353 RNU1-73P-201ENST00000383971 164 ntBASIC2.54□□□□□ -2
RIPK2O43353 SNORA9-201ENST00000384215 133 ntBASIC2.54□□□□□ -2
RIPK2O43353 U3.37-201ENST00000408528 213 ntBASIC2.54□□□□□ -2
RIPK2O43353 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.54□□□□□ -2
RIPK2O43353 MTCO2P21-201ENST00000419780 677 ntBASIC2.54□□□□□ -2
RIPK2O43353 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
RIPK2O43353 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.54□□□□□ -2
RIPK2O43353 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
RIPK2O43353 AL591719.1-201ENST00000444669 744 ntBASIC2.54□□□□□ -2
RIPK2O43353 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.54□□□□□ -2
RIPK2O43353 AC020550.1-201ENST00000447385 163 ntBASIC2.54□□□□□ -2
RIPK2O43353 ANKRD26P4-201ENST00000455755 950 ntBASIC2.54□□□□□ -2
RIPK2O43353 TRBV1-201ENST00000476502 284 ntBASIC2.54□□□□□ -2
RIPK2O43353 RPL7P18-201ENST00000478965 734 ntBASIC2.54□□□□□ -2
RIPK2O43353 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.54□□□□□ -2
RIPK2O43353 SCARNA3-201ENST00000517097 143 ntBASIC2.54□□□□□ -2
RIPK2O43353 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.54□□□□□ -2
RIPK2O43353 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.54□□□□□ -2
RIPK2O43353 AP003467.2-201ENST00000520175 319 ntBASIC2.54□□□□□ -2
RIPK2O43353 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.54□□□□□ -2
RIPK2O43353 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.54□□□□□ -2
RIPK2O43353 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.54□□□□□ -2
RIPK2O43353 AC009712.1-201ENST00000564938 316 ntBASIC2.54□□□□□ -2
RIPK2O43353 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
RIPK2O43353 AC024220.1-201ENST00000603675 484 ntBASIC2.54□□□□□ -2
RIPK2O43353 AC087683.2-201ENST00000611384 326 ntBASIC2.54□□□□□ -2
RIPK2O43353 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.54□□□□□ -2
RIPK2O43353 AP002782.1-201ENST00000623107 614 ntBASIC2.54□□□□□ -2
RIPK2O43353 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
RIPK2O43353 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.54□□□□□ -2
RIPK2O43353 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.53□□□□□ -2
RIPK2O43353 AC073346.2-201ENST00000624724 2058 ntBASIC2.53□□□□□ -2
RIPK2O43353 RNU1-140P-201ENST00000365040 165 ntBASIC2.53□□□□□ -2
RIPK2O43353 RNA5SP171-201ENST00000391071 115 ntBASIC2.53□□□□□ -2
RIPK2O43353 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.53□□□□□ -2
RIPK2O43353 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.53□□□□□ -2
RIPK2O43353 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.53□□□□□ -2
RIPK2O43353 AC098826.1-201ENST00000433943 471 ntBASIC2.53□□□□□ -2
RIPK2O43353 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.53□□□□□ -2
RIPK2O43353 MTND1P28-201ENST00000435623 950 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC080013.2-201ENST00000460866 323 ntBASIC2.53□□□□□ -2
RIPK2O43353 RPL7P49-201ENST00000471402 708 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC128713.1-201ENST00000471495 306 ntBASIC2.53□□□□□ -2
RIPK2O43353 HMGB1P36-201ENST00000487709 576 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC034222.1-201ENST00000494052 532 ntBASIC2.53□□□□□ -2
RIPK2O43353 MTCYBP35-201ENST00000503630 1137 ntBASIC2.53□□□□□ -2
RIPK2O43353 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.53□□□□□ -2
RIPK2O43353 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.53□□□□□ -2
RIPK2O43353 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.53□□□□□ -2
RIPK2O43353 RNU6-390P-201ENST00000516259 103 ntBASIC2.53□□□□□ -2
RIPK2O43353 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.53□□□□□ -2
RIPK2O43353 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.53□□□□□ -2
RIPK2O43353 AC010186.2-204ENST00000537668 439 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC009127.3-201ENST00000570531 403 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC024619.4-201ENST00000580924 316 ntBASIC2.53□□□□□ -2
RIPK2O43353 MIR3199-1-201ENST00000582434 88 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.53□□□□□ -2
RIPK2O43353 AL355598.1-201ENST00000604169 202 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC245297.2-201ENST00000610119 565 ntBASIC2.53□□□□□ -2
RIPK2O43353 AL139418.1-201ENST00000613613 177 ntBASIC2.53□□□□□ -2
RIPK2O43353 AC009159.2-201ENST00000617603 606 ntBASIC2.53□□□□□ -2
RIPK2O43353 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RIPK2O43353 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.53□□□□□ -2
RIPK2O43353 PCMTD1P7-201ENST00000634506 357 ntBASIC2.53□□□□□ -2
RIPK2O43353 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
RIPK2O43353 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIPK2O43353 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 SNORD62.1-201ENST00000362541 86 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 RNU6-289P-201ENST00000364093 107 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RIPK2O43353 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIPK2O43353 SKA2P1-201ENST00000425592 390 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 TPT1P14-201ENST00000448018 505 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.52□□□□□ -2.01
RIPK2O43353 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.52□□□□□ -2.01
RIPK2O43353 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
RIPK2O43353 LTV1P1-201ENST00000510683 1237 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AP005902.1-201ENST00000521358 186 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIPK2O43353 LRRC34P1-201ENST00000542742 915 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AC093012.1-202ENST00000549403 582 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.52□□□□□ -2.01
RIPK2O43353 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms