Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN3O15551 AC013267.1-201ENST00000458227 267 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN3O15551 RNU7-59P-201ENST00000459101 61 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN3O15551 OR5BN1P-201ENST00000532955 829 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN3O15551 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN3O15551 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN3O15551 AC021171.1-201ENST00000603137 706 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 AC034102.8-201ENST00000615146 484 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 FO624990.1-201ENST00000636373 85 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
CLDN3O15551 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN3O15551 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CLDN3O15551 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.65□□□□□ -1.98
CLDN3O15551 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.65□□□□□ -1.98
CLDN3O15551 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 SNORA41-201ENST00000384675 132 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 SNORA67.4-201ENST00000384688 142 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AL139095.1-201ENST00000404326 391 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN3O15551 AL162578.1-201ENST00000406202 378 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 PIGPP2-201ENST00000411569 458 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC023141.4-201ENST00000412031 328 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 MTCO2P8-201ENST00000412213 658 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN3O15551 AC106883.1-201ENST00000418805 562 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 USP9YP26-201ENST00000421008 661 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 AC244035.1-201ENST00000430042 390 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 HSFY7P-201ENST00000432672 318 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC098826.1-201ENST00000433943 471 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN3O15551 HSFY8P-201ENST00000437934 318 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AL445687.1-201ENST00000439946 251 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC009961.3-201ENST00000449832 765 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 CECR9-201ENST00000453421 199 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 HSFY5P-201ENST00000453726 309 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.65□□□□□ -1.99
CLDN3O15551 EIF4EP3-201ENST00000498782 656 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC091951.3-201ENST00000504093 246 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN3O15551 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC118465.1-201ENST00000513820 1271 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 SCARNA17.1-201ENST00000516211 143 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 SCARNA17.2-201ENST00000516334 143 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN3O15551 AL359212.1-201ENST00000556608 614 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 MIR3908-201ENST00000579798 126 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC060766.3-201ENST00000591442 263 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC068790.3-201ENST00000602988 553 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC007349.4-201ENST00000608114 532 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 AC103710.1-201ENST00000610003 901 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 SCARNA17.4-201ENST00000614296 143 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 AC103706.2-201ENST00000638080 240 ntBASIC2.65□□□□□ -1.99
CLDN3O15551 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN3O15551 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN3O15551 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
CLDN3O15551 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN3O15551 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 RPL21P132-201ENST00000331267 462 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 MIR1305-201ENST00000408300 86 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 RPL17P12-201ENST00000413391 526 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AL445669.1-201ENST00000426743 755 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 ELOCP14-201ENST00000428070 331 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 MED14P1-201ENST00000430517 648 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN3O15551 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 ELOCP7-201ENST00000439968 331 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN3O15551 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN3O15551 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CLDN3O15551 RN7SL636P-201ENST00000497504 294 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AC104685.1-201ENST00000502445 371 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AC008716.1-201ENST00000511084 513 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 SNORA31.18-201ENST00000517043 134 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AP000907.2-201ENST00000530827 353 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AC013828.2-201ENST00000532487 235 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 MTCO2P15-201ENST00000532655 656 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN3O15551 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN3O15551 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN3O15551 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN3O15551 SNHG22-203ENST00000617833 660 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN3O15551 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
CLDN3O15551 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms