Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC116618.1-201ENST00000634617 774 ntBASIC1.43□□□□□ -2.18
HMGB3O15347 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGB3O15347 MTCO1P4-201ENST00000520516 1409 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 MIR208A-201ENST00000362287 71 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 U3.13-201ENST00000364804 214 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 MIR491-201ENST00000384877 84 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 OR9R1P-201ENST00000412200 877 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AL445183.3-201ENST00000414168 502 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGB3O15347 AC008173.1-201ENST00000418901 264 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 SKA2P1-201ENST00000425592 390 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 IFNA20P-201ENST00000436840 528 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC092393.1-201ENST00000439625 742 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AL831737.1-201ENST00000441288 271 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 MTND3P4-201ENST00000453537 303 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGB3O15347 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGB3O15347 RNU7-140P-201ENST00000459546 60 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AL672167.3-201ENST00000465951 960 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
HMGB3O15347 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGB3O15347 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC027309.2-201ENST00000520566 192 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AP003122.3-201ENST00000526316 255 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC022880.1-201ENST00000534017 973 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.42□□□□□ -2.18
HMGB3O15347 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGB3O15347 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGB3O15347 DEFB122-202ENST00000569013 197 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGB3O15347 AC010928.2-201ENST00000588017 287 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC068790.3-201ENST00000602988 553 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC024257.5-201ENST00000612739 531 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC022202.1-201ENST00000613515 211 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AL118556.2-201ENST00000614375 824 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.42□□□□□ -2.18
HMGB3O15347 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGB3O15347 AC007490.1-201ENST00000624321 703 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AL590396.4-201ENST00000636779 956 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGB3O15347 AL136360.1-201ENST00000503377 1900 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 AL359854.1-201ENST00000614203 1594 ntBASIC1.42□□□□□ -2.18
HMGB3O15347 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HMGB3O15347 SNORD48-201ENST00000364953 64 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 RNU6-19P-201ENST00000384718 107 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGB3O15347 VN1R51P-201ENST00000411675 945 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC009238.1-201ENST00000442165 424 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC009237.6-201ENST00000446969 424 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 AC108729.2-201ENST00000476543 840 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 AC004924.1-201ENST00000480160 781 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGB3O15347 RNA5SP182-201ENST00000516064 82 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGB3O15347 AP000916.1-201ENST00000533869 835 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGB3O15347 MIR4285-201ENST00000581001 85 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC239868.4-201ENST00000608318 671 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC016911.1-201ENST00000613297 452 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 MIR3199-2-201ENST00000636243 86 ntBASIC1.41□□□□□ -2.18
HMGB3O15347 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HMGB3O15347 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGB3O15347 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGB3O15347 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
HMGB3O15347 MTCO1P9-201ENST00000505577 1534 ntBASIC1.4□□□□□ -2.18
HMGB3O15347 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HMGB3O15347 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HMGB3O15347 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.19
HMGB3O15347 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMGB3O15347 RNU6-492P-201ENST00000363035 104 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 RNU6-778P-201ENST00000363269 103 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGB3O15347 SUGT1P1-201ENST00000379514 476 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 SNORA8-201ENST00000384574 139 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 RNU2-2P-201ENST00000410396 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 RNU2-63P-201ENST00000410792 194 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 RNU6-516P-201ENST00000411381 104 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGB3O15347 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGB3O15347 Z98742.2-201ENST00000431564 187 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AC003989.2-201ENST00000440224 169 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AC114878.1-201ENST00000441166 358 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGB3O15347 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 BZW1P2-201ENST00000473537 826 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGB3O15347 AC034222.1-201ENST00000494052 532 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGB3O15347 AC010460.2-201ENST00000509054 677 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 RNA5SP112-201ENST00000515937 99 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGB3O15347 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGB3O15347 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms