Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AL645937.1-202ENST00000421799 937 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.75□□□□□ -1.81
NPHP1O15259 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.75□□□□□ -1.81
NPHP1O15259 AC087499.2-201ENST00000432861 149 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP1O15259 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 COX6CP12-201ENST00000446748 202 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 USP9YP12-201ENST00000450481 570 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 RNU7-23P-201ENST00000459465 62 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 ARL4AP2-201ENST00000507378 601 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 RN7SKP132-201ENST00000516001 208 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 RNA5SP471-201ENST00000516971 106 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AP006587.4-201ENST00000526053 529 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP1O15259 AC022878.1-201ENST00000530684 149 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.75□□□□□ -1.81
NPHP1O15259 TRAV37-201ENST00000553906 342 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP1O15259 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.75□□□□□ -1.81
NPHP1O15259 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 NRBF2P5-201ENST00000603087 788 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AC006338.1-201ENST00000618453 749 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 AC110079.1-202ENST00000635213 138 ntBASIC3.75□□□□□ -1.81
NPHP1O15259 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.75□□□□□ -1.81
NPHP1O15259 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP1O15259 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP1O15259 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
NPHP1O15259 RNA5SP139-201ENST00000364340 117 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 Y_RNA.245-201ENST00000364493 95 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 RNU6-851P-201ENST00000384565 107 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 MIR196B-201ENST00000384852 84 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AF228730.1-201ENST00000397972 663 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AL445529.1-201ENST00000398713 389 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 ELOCP14-201ENST00000428070 331 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP1O15259 MTND1P28-201ENST00000435623 950 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 ELOCP7-201ENST00000439968 331 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 MTND1P26-201ENST00000440488 538 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHP1O15259 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP1O15259 RPL12P25-201ENST00000455592 494 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP1O15259 MTND4LP3-201ENST00000468320 276 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHP1O15259 RAC1P5-201ENST00000512182 576 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 FABP5P5-201ENST00000515537 406 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP1O15259 AP003181.2-201ENST00000528941 181 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AP003122.4-201ENST00000530980 758 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.74□□□□□ -1.81
NPHP1O15259 AC128657.1-201ENST00000549459 145 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 ARL2BPP2-201ENST00000550907 489 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 RPS3AP4-201ENST00000555161 764 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 MIR548AB-201ENST00000584917 84 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP1O15259 AC098826.3-201ENST00000603823 466 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 AL161798.1-201ENST00000604630 131 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 RNU6-87P-201ENST00000607561 108 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP1O15259 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP1O15259 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP1O15259 AC099654.13-201ENST00000639774 207 ntBASIC3.74□□□□□ -1.81
NPHP1O15259 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP1O15259 AC008669.1-201ENST00000565823 2178 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 RNU6-701P-201ENST00000384059 107 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 MT-TH-201ENST00000387441 69 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 RNU2-36P-201ENST00000410361 191 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP1O15259 AC006366.1-201ENST00000422002 759 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 OOSP1P1-201ENST00000423265 274 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 CYCSP46-201ENST00000423569 204 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 RAC1P6-201ENST00000423911 575 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHP1O15259 SNORD97-201ENST00000459187 142 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 RPS29P12-201ENST00000460178 152 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
NPHP1O15259 MTND3P7-201ENST00000474435 343 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 HIGD1AP13-201ENST00000509878 289 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPHP1O15259 AC104984.5-201ENST00000586878 94 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 AC004832.5-201ENST00000608677 401 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP1O15259 AC091931.1-201ENST00000623488 728 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 AC092435.3-201ENST00000565538 3654 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 MAPK10-266ENST00000641066 6555 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
NPHP1O15259 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
NPHP1O15259 MTND5P27-201ENST00000428871 1720 ntBASIC3.73□□□□□ -1.81
NPHP1O15259 MTND5P29-201ENST00000458676 1807 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 RNU4-21P-201ENST00000362802 126 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 RNU4-1-201ENST00000363925 141 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 SNORA18.3-201ENST00000384122 132 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 RNU6-14P-201ENST00000384630 106 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 RPS4XP8-201ENST00000402039 771 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 RNA5SP508-201ENST00000411327 119 ntBASIC3.72□□□□□ -1.81
NPHP1O15259 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.72□□□□□ -1.81
NPHP1O15259 RPS15AP12-201ENST00000419498 388 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms