Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
TO15178 NEFMP1-201ENST00000443423 1006 ntBASIC3.08□□□□□ -1.92
TO15178 AC079781.2-201ENST00000446424 169 ntBASIC3.08□□□□□ -1.92
TO15178 AC079448.1-201ENST00000449377 373 ntBASIC3.08□□□□□ -1.92
TO15178 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.08□□□□□ -1.92
TO15178 RPL37P6-201ENST00000460682 294 ntBASIC3.08□□□□□ -1.92
TO15178 AC087588.1-201ENST00000462203 316 ntBASIC3.08□□□□□ -1.92
TO15178 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
TO15178 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.08□□□□□ -1.92
TO15178 AC105252.1-201ENST00000503089 286 ntBASIC3.08□□□□□ -1.92
TO15178 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.08□□□□□ -1.92
TO15178 AC010493.1-201ENST00000513479 292 ntBASIC3.08□□□□□ -1.92
TO15178 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.08□□□□□ -1.92
TO15178 RNU6-1282P-201ENST00000516735 96 ntBASIC3.08□□□□□ -1.92
TO15178 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TO15178 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 AC009063.1-201ENST00000563342 702 ntBASIC3.08□□□□□ -1.92
TO15178 AC015917.1-201ENST00000579654 510 ntBASIC3.08□□□□□ -1.92
TO15178 DPPA3P3-201ENST00000603842 430 ntBASIC3.08□□□□□ -1.92
TO15178 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
TO15178 AL136363.1-201ENST00000605349 337 ntBASIC3.08□□□□□ -1.92
TO15178 AL589994.2-201ENST00000621124 579 ntBASIC3.08□□□□□ -1.92
TO15178 AC068880.5-201ENST00000624331 290 ntBASIC3.08□□□□□ -1.92
TO15178 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TO15178 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
TO15178 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 AL049641.1-201ENST00000441055 1948 ntBASIC3.07□□□□□ -1.92
TO15178 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.07□□□□□ -1.92
TO15178 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TO15178 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TO15178 RNU6-1097P-201ENST00000363586 107 ntBASIC3.07□□□□□ -1.92
TO15178 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TO15178 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 Y_RNA.517-201ENST00000384551 106 ntBASIC3.07□□□□□ -1.92
TO15178 MIR23B-201ENST00000384832 97 ntBASIC3.07□□□□□ -1.92
TO15178 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.07□□□□□ -1.92
TO15178 AC093578.1-201ENST00000415219 368 ntBASIC3.07□□□□□ -1.92
TO15178 AC010975.2-201ENST00000427781 588 ntBASIC3.07□□□□□ -1.92
TO15178 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.07□□□□□ -1.92
TO15178 GPR143P-201ENST00000434155 205 ntBASIC3.07□□□□□ -1.92
TO15178 AL358232.1-201ENST00000448030 501 ntBASIC3.07□□□□□ -1.92
TO15178 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.07□□□□□ -1.92
TO15178 C1DP4-201ENST00000455429 424 ntBASIC3.07□□□□□ -1.92
TO15178 AL160314.1-201ENST00000490836 438 ntBASIC3.07□□□□□ -1.92
TO15178 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.07□□□□□ -1.92
TO15178 SNORA31.3-201ENST00000516029 96 ntBASIC3.07□□□□□ -1.92
TO15178 RNU6-1220P-201ENST00000517126 108 ntBASIC3.07□□□□□ -1.92
TO15178 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.07□□□□□ -1.92
TO15178 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.07□□□□□ -1.92
TO15178 AC090572.1-201ENST00000519251 160 ntBASIC3.07□□□□□ -1.92
TO15178 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
TO15178 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
TO15178 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
TO15178 TRAV28-201ENST00000557548 323 ntBASIC3.07□□□□□ -1.92
TO15178 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.07□□□□□ -1.92
TO15178 AC034105.3-201ENST00000565294 442 ntBASIC3.07□□□□□ -1.92
TO15178 MIR3609-201ENST00000582661 80 ntBASIC3.07□□□□□ -1.92
TO15178 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
TO15178 MIR4276-201ENST00000584832 70 ntBASIC3.07□□□□□ -1.92
TO15178 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 AC078795.2-201ENST00000602835 1252 ntBASIC3.07□□□□□ -1.92
TO15178 AC174048.1-201ENST00000603389 144 ntBASIC3.07□□□□□ -1.92
TO15178 AC104763.2-201ENST00000604179 382 ntBASIC3.07□□□□□ -1.92
TO15178 AC073657.2-201ENST00000605661 303 ntBASIC3.07□□□□□ -1.92
TO15178 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 AC034102.8-201ENST00000615146 484 ntBASIC3.07□□□□□ -1.92
TO15178 AC015540.1-201ENST00000615828 501 ntBASIC3.07□□□□□ -1.92
TO15178 AC136475.10-201ENST00000620253 385 ntBASIC3.07□□□□□ -1.92
TO15178 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.07□□□□□ -1.92
TO15178 MTND1P37-201ENST00000636562 264 ntBASIC3.07□□□□□ -1.92
TO15178 LRRC77P-213ENST00000637727 880 ntBASIC3.07□□□□□ -1.92
TO15178 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.07□□□□□ -1.92
TO15178 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
TO15178 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TO15178 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
TO15178 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TO15178 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TO15178 RNU6-181P-201ENST00000363225 107 ntBASIC3.06□□□□□ -1.92
TO15178 Y_RNA.296-201ENST00000364930 108 ntBASIC3.06□□□□□ -1.92
TO15178 RNU6-108P-201ENST00000365558 107 ntBASIC3.06□□□□□ -1.92
TO15178 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TO15178 RNU6-259P-201ENST00000383999 107 ntBASIC3.06□□□□□ -1.92
TO15178 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TO15178 GSTA9P-201ENST00000406231 611 ntBASIC3.06□□□□□ -1.92
TO15178 RNU2-33P-201ENST00000410344 192 ntBASIC3.06□□□□□ -1.92
TO15178 RNU2-39P-201ENST00000410604 198 ntBASIC3.06□□□□□ -1.92
TO15178 AC007919.1-201ENST00000429380 217 ntBASIC3.06□□□□□ -1.92
TO15178 YME1L1P1-201ENST00000429435 297 ntBASIC3.06□□□□□ -1.92
TO15178 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
TO15178 AL512844.2-201ENST00000433990 593 ntBASIC3.06□□□□□ -1.92
TO15178 RPL36AP6-201ENST00000435770 321 ntBASIC3.06□□□□□ -1.92
TO15178 Z82210.1-201ENST00000440037 231 ntBASIC3.06□□□□□ -1.92
TO15178 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.06□□□□□ -1.92
TO15178 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.06□□□□□ -1.92
TO15178 RNU6-953P-201ENST00000459154 107 ntBASIC3.06□□□□□ -1.92
TO15178 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.06□□□□□ -1.92
TO15178 RPL21P10-201ENST00000463521 490 ntBASIC3.06□□□□□ -1.92
TO15178 AC023194.1-201ENST00000493084 308 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms