Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 ZNF29P-201ENST00000225587 168 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RNU1-52P-201ENST00000384190 164 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RNU6-636P-201ENST00000384598 107 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 BTF3L4P3-201ENST00000418879 476 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 HMGB1P49-201ENST00000418882 569 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC005005.2-201ENST00000420779 380 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 USP9YP24-201ENST00000434374 697 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 MTND3P1-201ENST00000441336 220 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 MTCO3P45-201ENST00000443036 613 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 USP9YP17-201ENST00000444617 696 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC034222.1-201ENST00000494052 532 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RN7SL636P-201ENST00000497504 294 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RNU5F-8P-201ENST00000515941 111 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 TMF1P1-201ENST00000576058 373 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AL158042.1-201ENST00000605338 460 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 AL136981.2-201ENST00000617319 734 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.02□□□□□ -2.09
TNFRSF11BO00300 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TNFRSF11BO00300 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 ZNF658B-202ENST00000615961 3375 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 RNU6-462P-201ENST00000362659 105 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 RNU6-301P-201ENST00000384277 107 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 MIR221-201ENST00000385135 110 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 SEPT2P1-201ENST00000419651 180 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 COTL1P1-201ENST00000422309 375 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 NUP35P1-201ENST00000422734 947 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 MTCO2P23-201ENST00000425216 680 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 TXNL1P1-201ENST00000429528 554 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 SDR42E1P3-201ENST00000438345 502 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC108938.1-201ENST00000451204 136 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AL109933.2-201ENST00000452651 260 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC008481.1-201ENST00000463278 396 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 RPS3AP14-201ENST00000483907 780 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 MRPL42P6-201ENST00000486397 371 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AL160314.1-201ENST00000490836 438 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC104090.1-201ENST00000506341 1171 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AL033523.1-201ENST00000605153 153 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC112220.3-201ENST00000605502 502 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AL391834.2-201ENST00000609982 546 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 MIR7106-201ENST00000612419 65 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC135507.2-201ENST00000612443 309 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC022306.3-201ENST00000619930 550 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AP000676.3-201ENST00000623299 569 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AC093591.3-201ENST00000634516 308 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
TNFRSF11BO00300 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF11BO00300 MTND4P27-201ENST00000450813 1354 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 SNORA38-201ENST00000363946 132 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 SNORA4.1-201ENST00000364263 144 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
TNFRSF11BO00300 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2□□□□□ -2.09
TNFRSF11BO00300 SNORA51.11-201ENST00000384442 131 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 MIR888-201ENST00000401186 77 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2□□□□□ -2.09
TNFRSF11BO00300 AL359704.1-201ENST00000411586 781 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms