Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL6A5A8TX70 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
COL6A5A8TX70 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 RNU6-234P-201ENST00000365229 104 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 OR1L1-202ENST00000373686 1083 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 SNORA46.1-201ENST00000391069 153 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 SDCBPP1-201ENST00000440192 890 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 GDI2P2-201ENST00000445131 608 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 RSL24D1P11-201ENST00000591045 491 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.77□□□□□ -2.29
COL6A5A8TX70 AC067863.3-201ENST00000624172 122 ntBASIC0.77□□□□□ -2.29
COL6A5A8TX70 AL356379.1-201ENST00000414105 126 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 RPL21P90-201ENST00000415692 466 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 RNA5SP310-201ENST00000459084 116 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A5A8TX70 SNORA14.1-201ENST00000516113 141 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 NBEAP1-201ENST00000554452 979 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL6A5A8TX70 AC009090.3-201ENST00000616553 565 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 RNU6-955P-201ENST00000410497 104 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A5A8TX70 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.76□□□□□ -2.29
COL6A5A8TX70 HMGN2P21-201ENST00000447764 270 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 RPL30P12-201ENST00000474666 353 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 RNA5SP134-201ENST00000516492 96 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL6A5A8TX70 ZNF37BP-203ENST00000452306 1352 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 AL391516.1-201ENST00000554380 2449 ntBASIC0.76□□□□□ -2.29
COL6A5A8TX70 CD24P4-201ENST00000382840 243 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC074117.2-201ENST00000417130 397 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 HMGB1P49-201ENST00000418882 569 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 RPL37P6-202ENST00000464216 403 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 SNORA3.4-201ENST00000515969 96 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC022387.2-201ENST00000604050 448 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC010200.2-201ENST00000605098 235 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 SNORD114-3-201ENST00000364969 75 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC012497.1-201ENST00000429392 575 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 SNRPFP2-201ENST00000440710 251 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 ATG12P2-201ENST00000456830 416 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 RPS27P21-201ENST00000486977 252 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC105252.1-201ENST00000503089 286 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC025918.2-201ENST00000558683 763 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 AC022662.1-201ENST00000580252 331 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 RNA5SP108-201ENST00000605921 117 ntBASIC0.75□□□□□ -2.29
COL6A5A8TX70 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
COL6A5A8TX70 AP000648.3-201ENST00000623539 4507 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 PTENP1-201ENST00000447117 1215 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 SSXP4-201ENST00000451349 245 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 BZW1P2-201ENST00000473537 826 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 SNORA31.20-201ENST00000517111 133 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC068338.1-201ENST00000565567 176 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 MIR5194-201ENST00000582634 120 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC012443.1-201ENST00000605605 231 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC008962.1-201ENST00000605729 304 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC091304.6-201ENST00000619761 202 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 MFSD8-213ENST00000641134 1327 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL6A5A8TX70 RNU6-452P-201ENST00000384406 107 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 UBE2V1P9-201ENST00000414760 368 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 XKRYP1-201ENST00000423438 492 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 XKRYP2-201ENST00000432915 492 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AP000949.1-201ENST00000438328 629 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 CASP3P1-201ENST00000446037 609 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AL627224.1-201ENST00000448334 444 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.74□□□□□ -2.29
COL6A5A8TX70 AL121769.1-201ENST00000469473 401 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC103710.4-201ENST00000609301 899 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 AC024595.1-201ENST00000623088 387 ntBASIC0.74□□□□□ -2.29
COL6A5A8TX70 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 OR51A5P-201ENST00000415429 942 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC096632.1-201ENST00000427395 310 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 MTND3P24-201ENST00000506306 329 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 AP005597.4-201ENST00000526762 229 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC007834.2-201ENST00000536310 343 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 MIR3122-201ENST00000577243 73 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms