Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.65□□□□□ -1.5
RCCD1A6NED2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.65□□□□□ -1.5
RCCD1A6NED2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.65□□□□□ -1.5
RCCD1A6NED2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RCCD1A6NED2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RCCD1A6NED2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RCCD1A6NED2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
RCCD1A6NED2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.65□□□□□ -1.51
RCCD1A6NED2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RCCD1A6NED2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RCCD1A6NED2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RCCD1A6NED2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCCD1A6NED2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RCCD1A6NED2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RCCD1A6NED2 Y_RNA.121-201ENST00000363309 113 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 RNU6-153P-201ENST00000364422 104 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 RNA5SP510-201ENST00000364697 99 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 HLFP1-201ENST00000402375 499 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 CTSL3P-202ENST00000412179 788 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC098614.2-201ENST00000426040 255 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC005154.2-201ENST00000438110 379 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC006026.2-201ENST00000457376 180 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 MLLT10P2-201ENST00000506434 249 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 RNU6-1256P-201ENST00000516539 103 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 MIR548X2-201ENST00000579776 100 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC022441.3-201ENST00000605737 136 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 AL355480.1-201ENST00000629041 99 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RCCD1A6NED2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RCCD1A6NED2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCCD1A6NED2 AC010332.2-201ENST00000613083 1904 ntBASIC5.64□□□□□ -1.51
RCCD1A6NED2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AC023421.1-201ENST00000590535 1785 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 Y_RNA.127-201ENST00000363386 109 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 Y_RNA.412-201ENST00000384001 104 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNU6-142P-201ENST00000384019 107 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 SNORA29-201ENST00000384183 140 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNU6-159P-201ENST00000391080 106 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNU2-2P-201ENST00000410396 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 AL356867.1-201ENST00000429623 299 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 COX6B1P2-201ENST00000489624 230 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNU6-1198P-201ENST00000516904 67 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNA5SP165-201ENST00000517142 115 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 SUMO2P18-201ENST00000518873 252 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 AP006245.2-201ENST00000522004 300 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 MIR3921-201ENST00000577308 85 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AL590392.1-201ENST00000604960 446 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 AL138963.2-201ENST00000605137 226 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNU2-4P-201ENST00000606190 192 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.15-201ENST00000611544 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.16-201ENST00000613119 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.12-201ENST00000613778 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.9-201ENST00000615427 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.11-201ENST00000616345 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.2-201ENST00000616535 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.3-201ENST00000617785 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.19-201ENST00000618602 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 RNU2-1-201ENST00000618664 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.6-201ENST00000619225 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.5-201ENST00000619465 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 U2.10-201ENST00000620268 191 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 AC010266.2-201ENST00000564741 3255 ntBASIC5.63□□□□□ -1.51
RCCD1A6NED2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RCCD1A6NED2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RCCD1A6NED2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms