Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 Y_RNA.222-201ENST00000364264 102 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 Y_RNA.314-201ENST00000365114 102 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 RNU6-603P-201ENST00000411403 107 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPS12P5-201ENST00000423449 371 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC011816.1-201ENST00000441346 546 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC006011.1-201ENST00000442758 349 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC073910.1-201ENST00000445047 438 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC007967.1-201ENST00000455422 1159 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC008481.1-201ENST00000463278 396 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPL9P32-201ENST00000464118 620 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC010631.1-201ENST00000474150 156 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC084198.1-201ENST00000477747 402 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC006499.6-201ENST00000511169 607 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC092436.3-201ENST00000511788 257 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 Y_RNA.715-201ENST00000517082 110 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC110743.1-201ENST00000584870 478 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 MTND4LP5-201ENST00000605152 292 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 AL672167.1-205ENST00000641112 3080 ntBASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.31□□□□□ -1.56
LOC102724428A0A0B4J2F2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 RNU1-44P-201ENST00000384453 163 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 MIR7-3-201ENST00000384898 110 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 MT-TW-201ENST00000387382 68 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 SNORA68.2-201ENST00000391263 128 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPS23P10-201ENST00000416185 486 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPS15AP40-201ENST00000419621 391 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 OR2AH1P-201ENST00000425717 928 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AL591704.1-201ENST00000432574 275 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPL7P49-201ENST00000471402 708 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPL21P103-201ENST00000479921 488 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC108860.1-201ENST00000484521 383 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 Y_RNA.689-201ENST00000516589 107 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 IGHV3-76-201ENST00000522465 295 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC174048.1-201ENST00000603389 144 ntBASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.3□□□□□ -1.56
LOC102724428A0A0B4J2F2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 RNU1-35P-201ENST00000362782 153 ntBASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 Y_RNA.515-201ENST00000384535 112 ntBASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPL23AP33-201ENST00000442301 452 ntBASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 FTH1P25-201ENST00000447665 469 ntBASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 CR383656.7-201ENST00000548164 174 ntBASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LOC102724428A0A0B4J2F2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 SNORA20.1-201ENST00000364790 130 ntBASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 SNORA23-201ENST00000365128 182 ntBASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 MIR1179-201ENST00000408703 91 ntBASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 RPS26P47-201ENST00000427219 348 ntBASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 AL162389.1-201ENST00000449233 177 ntBASIC5.28□□□□□ -1.56
LOC102724428A0A0B4J2F2 AC239809.1-201ENST00000450470 217 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms