Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU2-1-201ENST00000618664 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.6-201ENST00000619225 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.5-201ENST00000619465 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.10-201ENST00000620268 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC110994.2-201ENST00000635481 492 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR7157-201ENST00000635801 60 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR4275-201ENST00000636486 87 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC004520.1-201ENST00000608362 1413 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 MTND4P21-201ENST00000453886 1357 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNA5SP289-201ENST00000362332 137 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-884P-201ENST00000363889 107 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNA5SP125-201ENST00000364843 120 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU1-148P-201ENST00000384472 162 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL7P27-201ENST00000403775 720 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL023284.1-201ENST00000403956 276 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 Z98742.3-201ENST00000418637 326 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC008850.1-201ENST00000427546 362 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC124916.1-201ENST00000444020 547 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 MTCYBP11-201ENST00000447254 1109 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-775P-201ENST00000459318 96 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RPS20P20-201ENST00000460498 340 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL121769.1-201ENST00000469473 401 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 RPS20P22-201ENST00000473700 357 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 UBL5P3-201ENST00000475112 231 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC072039.1-201ENST00000477611 581 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC104685.1-201ENST00000502445 371 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 NRON-201ENST00000517270 370 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC006518.2-201ENST00000542513 940 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL512310.1-201ENST00000548639 172 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR4648-201ENST00000580107 72 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC104984.5-201ENST00000586878 94 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC007229.1-201ENST00000590455 412 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AP001542.1-201ENST00000591314 200 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL391813.1-201ENST00000603098 260 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 MTND4LP5-201ENST00000605152 292 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL021997.1-201ENST00000605757 193 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AL603758.1-201ENST00000618654 241 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC002550.2-201ENST00000621246 394 ntBASIC1.36□□□□□ -2.19
TRAV1-1A0A0B4J248 AC104454.1-201ENST00000421341 1401 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 Y_RNA.548-201ENST00000384656 105 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 MTATP6P27-201ENST00000416987 621 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AL139415.2-201ENST00000431968 163 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 HMGB3P12-201ENST00000438745 556 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC098831.1-201ENST00000440661 216 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 MTND2P24-201ENST00000453434 806 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC026801.1-201ENST00000497178 464 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC105252.1-201ENST00000503089 286 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 HSPE1P18-201ENST00000517602 280 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC027807.1-201ENST00000559921 996 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC087241.4-201ENST00000612441 480 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC253576.2-201ENST00000618815 580 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC073592.7-201ENST00000623659 507 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC010889.1-201ENST00000566193 2666 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC011477.1-204ENST00000623416 1325 ntBASIC1.35□□□□□ -2.19
TRAV1-1A0A0B4J248 AC092881.1-201ENST00000638218 2733 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC002543.1-201ENST00000299783 1954 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL23AP29-201ENST00000397284 453 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RPS3AP44-201ENST00000425466 790 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms