Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AL137003.2-201ENST00000606924 2538 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC007656.2-201ENST00000624902 4547 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.248-201ENST00000364501 109 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-283P-201ENST00000364788 107 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 MTND1P23-201ENST00000416931 372 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 FDX1P2-201ENST00000450769 375 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 RPL36AP51-201ENST00000487216 318 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 NARSP2-201ENST00000518524 679 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 ADI1P3-201ENST00000549509 470 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 MIR1254-2-201ENST00000579553 63 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 MIR3922-201ENST00000585192 84 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AC008752.3-201ENST00000588113 712 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AL162413.1-201ENST00000603198 110 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 AL034408.1-202ENST00000636088 415 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 MIR1321-201ENST00000637766 79 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 API5P2-201ENST00000397055 1498 ntBASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN16Q9Y5I7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC073073.2-201ENST00000609827 2578 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC103988.1-201ENST00000566382 2177 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-996P-201ENST00000365438 107 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 SNORD37.1-201ENST00000390968 65 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP111-201ENST00000411386 101 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC068533.1-201ENST00000418542 415 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC091390.3-201ENST00000426478 338 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RPL21P40-201ENST00000428586 483 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AL356010.1-201ENST00000456364 102 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-420P-201ENST00000458780 107 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC083798.1-201ENST00000472671 131 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AP002812.1-201ENST00000495378 474 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC104806.1-201ENST00000508720 308 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-927P-201ENST00000516199 100 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP291-201ENST00000517222 105 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AP006245.1-201ENST00000522549 120 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 RANP3-201ENST00000530970 276 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC092325.1-201ENST00000566449 554 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC024619.4-201ENST00000580924 316 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 MIR4775-201ENST00000581168 75 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AL670379.4-201ENST00000605279 254 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLDN16Q9Y5I7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-61P-201ENST00000365528 109 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 SNORA69-201ENST00000383895 132 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 SNORA1.3-201ENST00000384676 136 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RPS4XP3-201ENST00000398541 413 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 MIR1277-201ENST00000408536 78 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RN7SKP27-201ENST00000410684 333 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 BX842559.1-201ENST00000419615 532 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC092573.2-201ENST00000434546 243 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms