Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC004972.1-201ENST00000623934 2209 ntBASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDP1Q9Y5B0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 SNORA71.3-201ENST00000362582 128 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNA5SP295-201ENST00000362655 121 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.100-201ENST00000363141 102 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNU4-66P-201ENST00000365199 138 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNU4-20P-201ENST00000365601 151 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 MIR514A2-201ENST00000385131 88 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 MIR514A3-201ENST00000385132 88 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL606923.1-201ENST00000406616 190 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNU2-39P-201ENST00000410604 198 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL353729.1-201ENST00000425044 720 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 OR2AS1P-201ENST00000427827 319 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 VDAC1P3-201ENST00000434069 851 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 SETP5-201ENST00000437270 562 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 SNORA71B-202ENST00000439232 272 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 MTCYBP6-201ENST00000441810 138 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL590639.1-201ENST00000456484 337 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.632-201ENST00000459189 102 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AL133162.1-201ENST00000463228 453 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RPL7L1P8-201ENST00000469911 741 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RPL7P49-201ENST00000471402 708 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-27P-201ENST00000516146 107 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.691-201ENST00000516611 103 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RN7SKP219-201ENST00000516825 296 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 NARSP2-201ENST00000518524 679 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AC026403.1-201ENST00000518938 295 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AP004371.1-201ENST00000525240 214 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AC026464.5-201ENST00000562497 722 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AC021646.1-201ENST00000605469 484 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 AC084757.4-201ENST00000616350 526 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CTDP1Q9Y5B0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-600P-201ENST00000362524 99 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.138-201ENST00000363462 102 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 SNORA73.2-201ENST00000364946 201 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.474-201ENST00000384341 102 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 SNORD3H-201ENST00000384486 214 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AP000567.1-201ENST00000406413 156 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AL451054.2-201ENST00000420896 202 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 MTCO3P44-201ENST00000510977 541 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 TTC39CP1-201ENST00000512513 755 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 RN7SKP18-201ENST00000516005 275 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AL133271.1-201ENST00000538229 291 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 HMGB1P50-201ENST00000605814 607 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC019176.2-201ENST00000611579 315 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC012314.7-201ENST00000619693 93 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC091925.2-201ENST00000625059 256 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 AC009093.8-201ENST00000641769 292 ntBASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDP1Q9Y5B0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTDP1Q9Y5B0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
CTDP1Q9Y5B0 AC002546.1-201ENST00000588041 2504 ntBASIC4.4□□□□□ -1.7
CTDP1Q9Y5B0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.4□□□□□ -1.7
CTDP1Q9Y5B0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTDP1Q9Y5B0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.7
CTDP1Q9Y5B0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC073343.1-201ENST00000328239 651 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms