Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPL23AP71-201ENST00000470966 469 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-513P-201ENST00000516104 104 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 FAM60DP-201ENST00000524174 632 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC127455.1-201ENST00000565496 145 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL158827.2-201ENST00000602494 330 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC012443.1-201ENST00000605605 231 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 MIR8069-1-201ENST00000616627 86 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL022401.1-201ENST00000619498 108 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 MIR8069-2-201ENST00000621412 86 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL691447.3-201ENST00000635020 330 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 U6.92-201ENST00000636464 89 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL592148.3-201ENST00000608771 2646 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC139713.2-214ENST00000642059 1811 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL672167.1-205ENST00000641112 3080 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-270P-201ENST00000364131 105 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-715P-201ENST00000365204 103 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-1329P-201ENST00000365664 107 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 RNA5SP397-201ENST00000391323 118 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 Y_RNA.590-201ENST00000410140 107 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 RNU2-61P-201ENST00000411069 191 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 MTND4LP9-201ENST00000427694 174 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 AC004975.1-201ENST00000428733 208 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 DAP3P1-201ENST00000441522 278 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 RAC1P7-201ENST00000445367 377 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 HSPE1P25-201ENST00000455484 251 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 AC021382.1-201ENST00000483523 359 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 Y_RNA.679-201ENST00000516416 91 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 snoU109.6-201ENST00000516831 118 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 MIR5701-3-201ENST00000578890 82 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 MIR5701-1-201ENST00000585138 82 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 AC008962.1-201ENST00000605729 304 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 MIR5701-2-201ENST00000615634 82 ntBASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDZRN3Q9UPQ7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-147P-201ENST00000383983 107 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 SNORA51.6-201ENST00000384151 125 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-278P-201ENST00000390945 109 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 MIR1271-201ENST00000408537 86 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 RN7SKP27-201ENST00000410684 333 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AC007098.1-201ENST00000420122 367 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AC022022.1-201ENST00000430304 178 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 MTCO1P5-201ENST00000433573 344 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AL591473.1-201ENST00000464297 313 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 FTH1P11-201ENST00000517577 551 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 COX6B1P6-201ENST00000522347 255 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 H3F3AP1-201ENST00000559984 334 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AC120057.2-201ENST00000571520 271 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AL121917.1-203ENST00000605534 577 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 MIR6716-201ENST00000613413 80 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AL136313.1-201ENST00000624804 202 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AC008873.1-201ENST00000625051 138 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 AP001642.1-201ENST00000624727 2117 ntBASIC6.11□□□□□ -1.43
PDZRN3Q9UPQ7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AL590240.1-201ENST00000334118 313 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-960P-201ENST00000364056 120 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 Y_RNA.504-201ENST00000384481 104 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 U3.22-201ENST00000391120 215 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AL592291.1-201ENST00000403830 352 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AL034374.1-201ENST00000406329 351 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 TMEM167AP1-201ENST00000423409 219 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 BX679664.1-201ENST00000434429 253 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AP000936.3-201ENST00000438127 255 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AC020890.1-201ENST00000491837 504 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 AC019206.1-201ENST00000621938 425 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms