Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 UBE2L2-201ENST00000254302 429 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.149-201ENST00000363558 117 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-1059P-201ENST00000363752 98 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 RNA5SP509-201ENST00000364577 119 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 SNORA71.2-201ENST00000364941 134 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.428-201ENST00000384078 102 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.455-201ENST00000384230 98 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AP000580.1-201ENST00000404439 358 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 SYF2P2-201ENST00000417620 583 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 EIF4EP1-201ENST00000422311 642 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AL732292.1-201ENST00000426692 226 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 HMGB1P9-201ENST00000429856 646 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AL731563.1-201ENST00000442202 214 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 H2AFZP5-201ENST00000446960 382 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 FTH1P25-201ENST00000447665 469 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 RPS15AP34-201ENST00000487776 387 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC022493.1-201ENST00000492984 337 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC133555.2-201ENST00000550213 292 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC084783.1-201ENST00000565846 910 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 MIR1273C-201ENST00000578669 77 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 MIR3939-201ENST00000582614 106 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AC104695.3-201ENST00000604052 296 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 AP005019.3-201ENST00000620418 560 ntBASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDC42EP3Q9UKI2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AL158163.1-201ENST00000603915 1649 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 DEFB108F-201ENST00000344638 222 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.47-201ENST00000362697 108 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RNU5A-1-201ENST00000362698 116 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.153-201ENST00000363615 91 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RNA5SP515-201ENST00000364570 118 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 MIR517A-201ENST00000385001 87 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 MT-TG-201ENST00000387429 68 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RN7SKP267-201ENST00000410381 285 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC093151.1-201ENST00000427711 313 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC011816.1-201ENST00000441346 546 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC011276.1-201ENST00000469688 323 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 HMGB1P22-201ENST00000505315 124 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-475P-201ENST00000516073 104 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-120P-201ENST00000516077 103 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RNA5SP471-201ENST00000516971 106 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-1315P-201ENST00000517187 99 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 SUB1P3-201ENST00000564581 315 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 FAM60BP-201ENST00000578364 658 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC022726.1-201ENST00000587475 207 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 PRR13P7-201ENST00000605538 430 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC107294.1-201ENST00000609524 467 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 U4.1-201ENST00000620349 87 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 Z99571.1-201ENST00000636677 394 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 AC116096.1-201ENST00000566804 2314 ntBASIC3.93□□□□□ -1.78
CDC42EP3Q9UKI2 MFSD8-242ENST00000641690 4199 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms