Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.3□□□□□ -2.2
SCN11AQ9UI33 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC093155.1-201ENST00000440164 826 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 TRGVB-201ENST00000453257 471 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 RNA5SP310-201ENST00000459084 116 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC108120.2-201ENST00000512973 294 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC008127.2-201ENST00000549925 1075 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.3□□□□□ -2.2
SCN11AQ9UI33 CYP3A137P-201ENST00000562436 69 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC233266.2-201ENST00000567067 528 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC025594.3-201ENST00000613068 790 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 AC111188.2-201ENST00000529697 1387 ntBASIC1.3□□□□□ -2.2
SCN11AQ9UI33 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 SNORA1.3-201ENST00000384676 136 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 MIR532-201ENST00000385025 91 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AL512604.1-201ENST00000404812 257 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC092745.2-202ENST00000411880 369 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 RPS27P1-201ENST00000450552 247 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 OR9N1P-202ENST00000494289 481 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC114801.2-201ENST00000503825 781 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AP003717.3-201ENST00000544832 1180 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC105245.1-201ENST00000581934 244 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 CCT4P2-201ENST00000233836 1548 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 SNORA51.12-201ENST00000384448 134 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 RNF2P1-201ENST00000442955 1010 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 GDI2P2-201ENST00000445131 608 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AL121769.1-201ENST00000469473 401 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC055731.1-201ENST00000474387 401 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 COL6A4P2-205ENST00000509855 506 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 SNORA31.25-201ENST00000517242 134 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 RNU2-19P-201ENST00000517288 84 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AL031274.2-201ENST00000599419 203 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC112191.3-201ENST00000604371 277 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC019131.2-201ENST00000609071 870 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AP005137.2-201ENST00000609238 400 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AL022578.1-201ENST00000439330 1433 ntBASIC1.29□□□□□ -2.2
SCN11AQ9UI33 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 RNA5SP354-201ENST00000391247 136 ntBASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AC008850.1-201ENST00000427546 362 ntBASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AC105313.1-201ENST00000509121 353 ntBASIC1.28□□□□□ -2.2
SCN11AQ9UI33 SNORA31.18-201ENST00000517043 134 ntBASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AC103810.9-201ENST00000606688 112 ntBASIC1.28□□□□□ -2.2
SCN11AQ9UI33 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN11AQ9UI33 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SCN11AQ9UI33 AL133384.1-201ENST00000412744 351 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 CYCSP48-201ENST00000417124 323 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 AL500527.1-201ENST00000448532 255 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 SNORA31.16-201ENST00000516773 139 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 AC092451.2-201ENST00000538746 658 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 AC096772.1-201ENST00000609146 564 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN11AQ9UI33 AL138955.1-201ENST00000622881 1040 ntBASIC1.27□□□□□ -2.21
SCN11AQ9UI33 RPS4XP3-201ENST00000398541 413 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC023347.2-201ENST00000433994 462 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 PCNAP1-201ENST00000505363 709 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC104108.1-201ENST00000509930 412 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC079148.1-201ENST00000565944 819 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC092140.2-201ENST00000618027 521 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC080100.1-201ENST00000624239 5356 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 RNU6-716P-201ENST00000365621 103 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC108078.1-201ENST00000508073 725 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC133963.2-201ENST00000513686 578 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SCN11AQ9UI33 AC078899.2-201ENST00000595282 212 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 FAM157B-203ENST00000639350 358 ntBASIC1.26□□□□□ -2.21
SCN11AQ9UI33 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SCN11AQ9UI33 SNORA68.1-201ENST00000364537 132 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 MT-TP-201ENST00000387461 68 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 AL353689.1-201ENST00000438895 199 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms