Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 ARPC3P1-201ENST00000437218 533 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC011816.1-201ENST00000441346 546 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 OR6C5P-201ENST00000452388 923 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 GSTA11P-201ENST00000452866 669 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 RPS29P12-201ENST00000460178 152 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC072039.1-201ENST00000477611 581 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 SRIP1-201ENST00000489235 288 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC055855.1-201ENST00000489563 579 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AP000907.2-201ENST00000530827 353 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AP001004.1-201ENST00000582468 324 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC018714.1-201ENST00000605028 208 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC021755.4-201ENST00000616620 456 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC005858.4-201ENST00000623191 700 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AC097655.1-201ENST00000635075 318 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 MTND1P37-201ENST00000636562 264 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC104454.1-201ENST00000421341 1401 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RNU6-278P-201ENST00000390945 109 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC119751.3-201ENST00000399720 670 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RNU2-33P-201ENST00000410344 192 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 HMGN2P35-201ENST00000412164 270 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RPL17P12-201ENST00000413391 526 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RPL23AP39-201ENST00000415533 405 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AL096701.2-201ENST00000416920 238 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 USP9YP26-201ENST00000421008 661 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC099548.1-201ENST00000421443 426 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC010099.3-201ENST00000423896 409 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 LARP1BP3-201ENST00000437229 869 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AL008629.1-201ENST00000438615 184 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AL049734.2-201ENST00000441066 616 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 MRPL50P4-201ENST00000446432 475 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 LINC00888-204ENST00000487386 421 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RNU6-826P-201ENST00000516827 104 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 EEF1A1P37-201ENST00000522748 715 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 ELOCP31-201ENST00000540463 467 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC123904.3-201ENST00000547218 814 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC093012.1-202ENST00000549403 582 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 U73023.1-201ENST00000603134 700 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 AC107214.2-201ENST00000608204 634 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
CLCF1Q9UBD9 Z82195.2-201ENST00000612348 18351 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 RNU6-217P-201ENST00000384164 104 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 MIR27B-201ENST00000385129 97 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 RAP1BP1-201ENST00000412709 553 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 VPS26BP1-201ENST00000417155 755 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 ATG3P1-201ENST00000419507 911 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 ZNF863P-201ENST00000426746 417 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AL714022.1-201ENST00000439897 151 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 DDX3P2-201ENST00000446138 111 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 CACYBPP2-201ENST00000453625 678 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC010631.1-201ENST00000474150 156 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC116337.2-201ENST00000477662 156 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms