Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 LARP1BP2-201ENST00000486594 519 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 ZNF519P3-201ENST00000557158 1032 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC002545.1-201ENST00000592511 181 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC024153.1-201ENST00000603103 365 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AL359999.1-201ENST00000604513 294 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC012360.2-201ENST00000609349 391 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 uc_338.12-201ENST00000616344 181 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC104010.1-201ENST00000616889 150 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC010338.1-201ENST00000621823 717 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 AC084035.1-201ENST00000634543 607 ntBASIC3.64□□□□□ -1.83
SMC4Q9NTJ3 RNU4-21P-201ENST00000362802 126 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 RNU6-533P-201ENST00000384144 107 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 MIR325-201ENST00000385260 98 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC244035.1-201ENST00000430042 390 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 RPL22P17-201ENST00000438729 315 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AF131216.2-201ENST00000512316 564 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 MTND5P13-201ENST00000513046 1079 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 RN7SKP258-201ENST00000517151 304 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC022616.6-201ENST00000520479 119 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC123904.2-201ENST00000548059 300 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC012414.6-201ENST00000568241 401 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 MIR5697-201ENST00000578045 78 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 MIR548AB-201ENST00000584917 84 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC121334.2-201ENST00000605387 271 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AL391813.2-201ENST00000609113 322 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC090115.4-201ENST00000609970 188 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC138749.5-201ENST00000611461 208 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC027807.2-201ENST00000616099 408 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC116165.2-201ENST00000616705 206 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC092140.2-201ENST00000618027 521 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 AC092593.1-201ENST00000515413 1815 ntBASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMC4Q9NTJ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 SNORA51.4-201ENST00000364993 124 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RNU6-217P-201ENST00000384164 104 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 Y_RNA.608-201ENST00000410647 95 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RNU2-62P-201ENST00000410868 191 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RPS20P5-201ENST00000434808 360 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RPL21P2-201ENST00000440049 481 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 COX6CP12-201ENST00000446748 202 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 SNRPGP6-201ENST00000451124 220 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 SNORA59A-201ENST00000459326 152 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC003982.1-202ENST00000469928 248 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC091826.1-201ENST00000514065 313 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RNU6-390P-201ENST00000516259 103 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 CYCSP39-201ENST00000565821 309 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AL451007.1-201ENST00000595491 289 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC008277.2-201ENST00000605196 797 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC105129.3-201ENST00000605455 485 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AL627309.6-201ENST00000606857 840 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 AC108747.1-201ENST00000609508 535 ntBASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.62□□□□□ -1.83
SMC4Q9NTJ3 RNU6-270P-201ENST00000364131 105 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 MIR181B1-201ENST00000385240 110 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 ELOCP17-201ENST00000414751 326 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AL139281.1-201ENST00000422120 335 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 CYCSP46-201ENST00000423569 204 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 MTND1P12-201ENST00000455231 147 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AC087588.1-201ENST00000462203 316 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 RPS3AP14-201ENST00000483907 780 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms