Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC021749.1-201ENST00000604322 607 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 MTND4LP5-201ENST00000605152 292 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 MTND4P27-201ENST00000450813 1354 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 RNU1-73P-201ENST00000383971 164 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 RNU6-114P-201ENST00000384704 105 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL109755.1-201ENST00000401791 649 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 ZNF863P-201ENST00000426746 417 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 OR10R1P-201ENST00000441524 1141 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 MTND1P31-201ENST00000449206 961 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC021382.1-201ENST00000483523 359 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC114786.4-201ENST00000508771 728 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC114797.1-201ENST00000514003 728 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL391261.3-201ENST00000557194 520 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 BNIP3P26-201ENST00000600827 554 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL161729.4-201ENST00000604650 476 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC013476.2-201ENST00000614456 459 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AL138955.1-201ENST00000622881 1040 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 AC019226.1-201ENST00000625666 515 ntBASIC2.13□□□□□ -2.07
TREX1Q9NSU2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.13□□□□□ -2.07
TREX1Q9NSU2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AL138713.1-201ENST00000624026 2130 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 RNU6-359P-201ENST00000365466 108 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 RNU6-217P-201ENST00000384164 104 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 RNU6-140P-201ENST00000384566 108 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 RNU6-1000P-201ENST00000391066 106 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 TPMTP3-201ENST00000411928 735 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 HMGB1P49-201ENST00000418882 569 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 USP12PX-201ENST00000432383 1057 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 MTCO2P25-201ENST00000447065 681 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 ATG12P2-201ENST00000456830 416 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 MTND1P16-201ENST00000465177 898 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 MRPS17P3-201ENST00000465453 385 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC105252.1-201ENST00000503089 286 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 DEFB131D-201ENST00000526803 184 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC027807.1-201ENST00000559921 996 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AL139344.1-201ENST00000605228 195 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 SNORD14A-201ENST00000606526 91 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 PART1_2.1-201ENST00000612397 250 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC008498.1-201ENST00000613012 531 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC010133.1-201ENST00000615809 842 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC013437.2-201ENST00000639587 677 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 AC010329.5-201ENST00000623497 2174 ntBASIC2.12□□□□□ -2.07
TREX1Q9NSU2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 MIR449A-201ENST00000362113 91 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 RNU6-289P-201ENST00000364093 107 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 Y_RNA.472-201ENST00000384322 102 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 RNU6-1257P-201ENST00000384625 110 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 NPM1P11-201ENST00000417106 855 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 WARS2P1-201ENST00000429678 537 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 RPL12P25-201ENST00000455592 494 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 MEMO1P3-201ENST00000459811 302 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC104563.1-201ENST00000476147 376 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC022447.3-201ENST00000506865 495 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AP003497.1-201ENST00000528472 562 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AP002770.2-201ENST00000543613 532 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC135628.1-201ENST00000568867 534 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 OR4K7P-201ENST00000580232 945 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL353997.4-201ENST00000586196 166 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL121917.1-203ENST00000605534 577 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms