Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AL096803.2-201ENST00000450032 677 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC104073.1-201ENST00000451988 151 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 RNU1-123P-201ENST00000458950 160 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 HMGB1P36-201ENST00000487709 576 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC107953.1-201ENST00000522216 297 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 HAUS1P3-201ENST00000523909 662 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AP003033.1-201ENST00000527244 415 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 EEF1B2P4-201ENST00000551398 348 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AL391261.3-201ENST00000557194 520 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC103987.3-201ENST00000582071 292 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC010738.1-201ENST00000604970 987 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC008498.1-201ENST00000613012 531 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC090132.2-201ENST00000615881 347 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AC091812.1-201ENST00000432235 1948 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 AL049641.1-201ENST00000441055 1948 ntBASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CDC42SE2Q9NRR3 RNA5SP126-201ENST00000365092 109 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC016769.3-201ENST00000396562 315 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC010385.1-201ENST00000412374 256 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 RPL30P13-201ENST00000418873 348 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AL121882.1-201ENST00000422893 417 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 BMI1P1-201ENST00000445879 941 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 HMGN2P10-201ENST00000448085 265 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 RPL23AP23-201ENST00000452590 471 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 snoU109.4-201ENST00000458953 143 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 snoU13.15-201ENST00000459407 104 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC114801.2-201ENST00000503825 781 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC025459.1-201ENST00000504072 156 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 RN7SKP179-201ENST00000516126 217 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC008443.7-201ENST00000622195 246 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 AC090772.4-201ENST00000623599 362 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 ZNF209P-201ENST00000593450 2304 ntBASIC0.88□□□□□ -2.27
CDC42SE2Q9NRR3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 RNU6-750P-201ENST00000390946 107 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 RNU6-882P-201ENST00000391025 103 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AL590084.1-201ENST00000407885 387 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 RNU2-49P-201ENST00000410666 184 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 BX276092.3-201ENST00000424182 230 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 RAC1P7-201ENST00000445367 377 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 MTCO1P48-201ENST00000448024 1096 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC114982.2-201ENST00000461396 358 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 MRPS17P3-201ENST00000465453 385 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 VPS26AP1-201ENST00000483197 979 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 HMGB1P35-201ENST00000503360 598 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 SNORA44.1-201ENST00000517031 108 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AP000873.5-201ENST00000533906 236 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 TRAV11-201ENST00000539512 339 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC027807.1-201ENST00000559921 996 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 SUB1P3-201ENST00000564581 315 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC105245.1-201ENST00000581934 244 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC105224.1-201ENST00000587055 421 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AL031274.2-201ENST00000599419 203 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AL137246.1-201ENST00000607072 977 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC117490.2-201ENST00000610042 594 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 FRG1HP-204ENST00000617940 757 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC068722.2-201ENST00000618734 544 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 AC018926.3-201ENST00000618841 406 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 ZNF663P-202ENST00000641770 1131 ntBASIC0.87□□□□□ -2.27
CDC42SE2Q9NRR3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 ZNF29P-201ENST00000225587 168 ntBASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 MIR26B-201ENST00000362251 77 ntBASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 RNU6-444P-201ENST00000383988 108 ntBASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 UBE2FP1-201ENST00000416536 447 ntBASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.86□□□□□ -2.27
CDC42SE2Q9NRR3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms