Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RNU6-190P-201ENST00000384154 102 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 Y_RNA.450-201ENST00000384198 113 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RPL21P17-201ENST00000397467 475 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AL591416.1-201ENST00000404015 867 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 BTF3L4P3-201ENST00000418879 476 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC007919.1-201ENST00000429380 217 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC092573.2-201ENST00000434546 243 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 FABP5P13-201ENST00000452144 328 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RPS29P15-201ENST00000458329 171 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RNU7-63P-201ENST00000459054 62 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RN7SL594P-201ENST00000470590 287 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RPL7P5-201ENST00000471472 736 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RPL21P129-201ENST00000491732 478 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RPL30P5-201ENST00000494923 336 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AP002812.1-201ENST00000495378 474 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 MIR2276-201ENST00000516886 89 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RANP9-201ENST00000519957 271 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC007991.1-201ENST00000522680 631 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 CASP1P1-201ENST00000526345 212 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AL157687.1-201ENST00000554853 619 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC006133.1-201ENST00000617106 264 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 AC039056.2-201ENST00000622261 511 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 MTND1P37-201ENST00000636562 264 ntBASIC3.18□□□□□ -1.9
HINT3Q9NQE9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HINT3Q9NQE9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC007785.2-201ENST00000598627 1916 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNA5SP124-201ENST00000362739 110 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 SNORD115-7-201ENST00000365306 82 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNU6-483P-201ENST00000384088 108 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 SNORD115-47-201ENST00000391226 86 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AP000567.1-201ENST00000406413 156 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNU2-33P-201ENST00000410344 192 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RN7SKP53-201ENST00000411337 315 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC092809.3-201ENST00000415453 231 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AL109913.1-201ENST00000421173 514 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 MTND4P25-201ENST00000441039 533 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 PIGFP3-201ENST00000441918 722 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC006539.3-201ENST00000454258 129 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNU6-420P-201ENST00000458780 107 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RPL23AP62-201ENST00000463396 453 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC083798.1-201ENST00000472671 131 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RPL36AP51-201ENST00000487216 318 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AF213884.2-201ENST00000510417 903 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 SNORA40.12-201ENST00000516329 111 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNU1-95P-201ENST00000516357 160 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 Y_RNA.689-201ENST00000516589 107 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 SNORA67.7-201ENST00000516664 135 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNU1-128P-201ENST00000516704 160 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 RNA5SP471-201ENST00000516971 106 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 MIR5047-201ENST00000579212 100 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC008752.3-201ENST00000588113 712 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC093788.1-201ENST00000609356 927 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC130324.3-201ENST00000614165 542 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AP001486.3-201ENST00000615334 372 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AC011155.2-201ENST00000623202 216 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 U6.114-201ENST00000636407 96 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 ZNF285B-201ENST00000561698 1767 ntBASIC3.17□□□□□ -1.9
HINT3Q9NQE9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms