Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC025918.2-201ENST00000558683 763 ntBASIC0.9□□□□□ -2.27
CHD8Q9HCK8 MIR4512-201ENST00000583257 77 ntBASIC0.9□□□□□ -2.27
CHD8Q9HCK8 AC005786.1-201ENST00000588553 154 ntBASIC0.9□□□□□ -2.27
CHD8Q9HCK8 RSL24D1P11-201ENST00000591045 491 ntBASIC0.9□□□□□ -2.27
CHD8Q9HCK8 AC112503.2-201ENST00000609005 552 ntBASIC0.9□□□□□ -2.27
CHD8Q9HCK8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
CHD8Q9HCK8 U4.2-201ENST00000618561 85 ntBASIC0.9□□□□□ -2.27
CHD8Q9HCK8 AL157700.1-201ENST00000561973 1432 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 RPL23AP47-201ENST00000408017 460 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 DPPA3P1-201ENST00000448050 469 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 RPL23AP41-201ENST00000484754 458 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 RNA5SP82-201ENST00000516707 92 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 SNRPGP17-201ENST00000603780 214 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AC018754.1-201ENST00000607486 925 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AL589935.2-201ENST00000616471 1231 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 HSFY3P-201ENST00000444242 1191 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.89□□□□□ -2.27
CHD8Q9HCK8 MIR4446-201ENST00000578505 67 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 SNRPGP15-201ENST00000600149 222 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 AC092140.2-201ENST00000618027 521 ntBASIC0.89□□□□□ -2.27
CHD8Q9HCK8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AL354685.2-201ENST00000448218 1447 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RPS27P1-201ENST00000450552 247 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC104308.1-201ENST00000454621 333 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RNU6-1218P-201ENST00000458990 108 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RPL21P39-201ENST00000463605 483 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 BTF3P12-201ENST00000519620 469 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RNU6-50P-201ENST00000362356 103 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 MIR153-2-201ENST00000385225 87 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 SUMO2P12-201ENST00000405924 140 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC109780.2-201ENST00000413467 845 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 IFNA20P-201ENST00000436840 528 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 XKRYP6-201ENST00000440468 1116 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 XKRYP3-201ENST00000442113 1116 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RPS20P10-201ENST00000451209 253 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC104692.1-201ENST00000472406 90 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RPL21P93-201ENST00000480465 489 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC233702.1-201ENST00000482905 502 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC093591.1-201ENST00000491435 481 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC114322.1-201ENST00000506771 926 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 SNORD59.2-201ENST00000516873 68 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 HMGB1P46-201ENST00000520062 610 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.88□□□□□ -2.27
CHD8Q9HCK8 SNORD84-203ENST00000584275 78 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 RPL21P136-201ENST00000605378 396 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 AC116563.2-201ENST00000624751 535 ntBASIC0.88□□□□□ -2.27
CHD8Q9HCK8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 RNA5SP393-201ENST00000363423 117 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 RNU6-112P-201ENST00000363599 104 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 OR1L1-202ENST00000373686 1083 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 SSXP9-201ENST00000417503 292 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 TRGV6-201ENST00000417928 299 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 RPL31P63-201ENST00000422565 375 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 snoU109.1-201ENST00000459339 135 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 DEFB108E-201ENST00000524692 240 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 CYCSP2-201ENST00000558168 301 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC087465.1-201ENST00000560574 245 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC079148.1-201ENST00000565944 819 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC011468.4-201ENST00000603942 409 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC116618.1-201ENST00000634617 774 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD8Q9HCK8 AC240442.1-201ENST00000616055 283 ntBASIC0.87□□□□□ -2.27
CHD8Q9HCK8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CHD8Q9HCK8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CHD8Q9HCK8 Y_RNA.288-201ENST00000364854 92 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 RN7SKP51-201ENST00000410781 304 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 RNU2-71P-201ENST00000411395 189 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 HMGB1P49-201ENST00000418882 569 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.86□□□□□ -2.27
CHD8Q9HCK8 RNA5SP108-201ENST00000605921 117 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 AP000776.1-201ENST00000530032 1663 ntBASIC0.86□□□□□ -2.27
CHD8Q9HCK8 TXNP7-201ENST00000406296 293 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms