Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.54□□□□□ -2
NXF3Q9H4D5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.54□□□□□ -2
NXF3Q9H4D5 AC024589.1-201ENST00000512207 263 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 TBCAP3-201ENST00000512475 312 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.54□□□□□ -2
NXF3Q9H4D5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.54□□□□□ -2
NXF3Q9H4D5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.54□□□□□ -2
NXF3Q9H4D5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.54□□□□□ -2
NXF3Q9H4D5 AC105224.1-201ENST00000587055 421 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 BBIP1P1-201ENST00000602999 279 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC021171.1-201ENST00000603137 706 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AL353778.1-201ENST00000603149 408 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC004853.1-201ENST00000604902 698 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC018714.1-201ENST00000605028 208 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AL139344.1-201ENST00000605228 195 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC018638.7-201ENST00000605836 1114 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC090186.1-201ENST00000605991 572 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC009159.1-201ENST00000618386 642 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AC027309.3-201ENST00000623419 351 ntBASIC2.54□□□□□ -2
NXF3Q9H4D5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.54□□□□□ -2
NXF3Q9H4D5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NXF3Q9H4D5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2
NXF3Q9H4D5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 RPL21P132-201ENST00000331267 462 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL161781.1-201ENST00000354277 403 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.53□□□□□ -2
NXF3Q9H4D5 RNU6-433P-201ENST00000363216 104 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 RNU6-1197P-201ENST00000391183 107 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL590084.2-201ENST00000401481 382 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL049545.1-201ENST00000401856 572 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 RN7SKP223-201ENST00000410582 62 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 RNU2-47P-201ENST00000410649 186 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL135786.1-201ENST00000415892 214 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 NPM1P11-201ENST00000417106 855 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.53□□□□□ -2
NXF3Q9H4D5 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 MTND5P25-201ENST00000430499 799 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL139415.2-201ENST00000431968 163 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AC104563.1-201ENST00000476147 376 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC068587.2-201ENST00000478386 781 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AC093809.1-201ENST00000509155 340 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 MTCYBP43-201ENST00000513621 740 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.53□□□□□ -2
NXF3Q9H4D5 MTCO1P47-201ENST00000523889 1271 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.53□□□□□ -2
NXF3Q9H4D5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AC145350.1-201ENST00000567426 208 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AC060766.3-201ENST00000591442 263 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AP000811.1-201ENST00000603803 651 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL161734.1-201ENST00000609720 557 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AL360219.1-201ENST00000610230 366 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 MIR6130-201ENST00000619419 109 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC120349.3-201ENST00000624377 529 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.53□□□□□ -2
NXF3Q9H4D5 AC110079.1-202ENST00000635213 138 ntBASIC2.53□□□□□ -2
NXF3Q9H4D5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
NXF3Q9H4D5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNU6-359P-201ENST00000365466 108 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNA5SP88-201ENST00000365560 109 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNU1-73P-201ENST00000383971 164 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNU6-723P-201ENST00000383973 107 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNU6-253P-201ENST00000384730 105 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 MIR135A2-201ENST00000384854 100 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RN7SKP266-201ENST00000410232 287 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RNA5SP425-201ENST00000410336 112 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RN7SKP192-201ENST00000411291 327 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC011233.1-201ENST00000422812 283 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AL593851.1-201ENST00000426171 157 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RPS15AP28-201ENST00000435088 386 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 UBE2FP3-201ENST00000436366 524 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 SNRPGP6-201ENST00000451124 220 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms