Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 VN1R80P-201ENST00000597126 338 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AL671309.1-201ENST00000603750 544 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AL359821.1-201ENST00000605519 182 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 MIR6130-201ENST00000619419 109 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AC098657.3-201ENST00000620434 263 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 uc_338.20-201ENST00000621563 178 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 CENPCP1-201ENST00000533085 2578 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 MTND4P27-201ENST00000450813 1354 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AC005832.2-201ENST00000538921 1430 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AL356131.1-201ENST00000405826 414 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 RPS7P9-201ENST00000414704 586 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 TRIM60P13-201ENST00000432350 1283 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 MICF-203ENST00000432679 129 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AL049734.2-201ENST00000441066 616 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 RPS29P11-201ENST00000496507 171 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC023141.11-201ENST00000508864 202 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 HSPE1P3-201ENST00000559254 309 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC087465.1-201ENST00000560574 245 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 RN7SL622P-201ENST00000585292 275 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 KATNBL1P5-201ENST00000605015 517 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC005332.10-201ENST00000612725 619 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 AC108479.2-201ENST00000617314 601 ntBASIC2.2□□□□□ -2.06
UPF3BQ9BZI7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 RNU6-839P-201ENST00000363347 108 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 RNU6-217P-201ENST00000384164 104 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AL592310.1-201ENST00000414330 671 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 CCDC58P2-201ENST00000417131 366 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 BNIP3P2-201ENST00000441221 577 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 RPL23AP76-201ENST00000441860 458 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 FABP5P13-201ENST00000452144 328 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC097493.1-201ENST00000463958 372 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC005840.1-201ENST00000498412 377 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 BOLA3P3-201ENST00000505182 232 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 RNU6-885P-201ENST00000516607 104 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AL391261.3-201ENST00000557194 520 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC093510.2-201ENST00000562820 896 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 BNIP3P24-201ENST00000593398 557 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 KATNBL1P1-201ENST00000605192 748 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC080188.3-201ENST00000624842 748 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 MIR4275-201ENST00000636486 87 ntBASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UPF3BQ9BZI7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 OR1L1-202ENST00000373686 1083 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 RNU6-549P-201ENST00000384433 107 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 MIR514A1-201ENST00000385133 98 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 RPS3AP24-201ENST00000407896 734 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 BTF3P4-201ENST00000418852 495 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 MTCYBP45-201ENST00000435243 565 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 Z80107.1-201ENST00000436830 412 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AL353691.1-201ENST00000451332 387 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 ANKRD26P4-201ENST00000455755 950 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 snoZ278.1-201ENST00000517059 112 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 SNORA31.22-201ENST00000517204 135 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AP002748.2-201ENST00000528671 348 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 SUB1P3-201ENST00000564581 315 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 MTCO1P40-201ENST00000574371 625 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC068790.3-201ENST00000602988 553 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 AC021749.1-201ENST00000604322 607 ntBASIC2.18□□□□□ -2.06
UPF3BQ9BZI7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 MIR325-201ENST00000385260 98 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AL030996.1-201ENST00000411430 235 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC018630.2-202ENST00000422992 927 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms